HHsearch alignment for GI: 254780916 and conserved domain: COG0745

>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].
Probab=99.86  E-value=7.9e-21  Score=166.85  Aligned_cols=118  Identities=21%  Similarity=0.279  Sum_probs=108.8

Q ss_pred             CCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH-CCCCCEEEEE
Q ss_conf             838998699899999999999889889998937--9999860899899997854698889999999985-7898399992
Q gi|254780916|r   11 KRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDK-IPIVPIIVQT   87 (482)
Q Consensus        11 ~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~-~p~ipvIiiT   87 (482)
T Consensus         1 ~~ILiveDd~~i~~~l~~~L~~~G~~v~~~~~~~~a~~~~~~~-~dlviLD~~lP~~dG~~~~~~iR~~~~~~~PIi~Lt   79 (229)
T COG0745           1 MRILLVEDDPELAELLKEYLEEEGYEVDVAADGEEALEAAREQ-PDLVLLDLMLPDLDGLELCRRLRAKKGSGPPIIVLT   79 (229)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC-CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             9899991888999999999987597899978989999997269-999999889998568999999985168999889996


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             689999999888505743222222222222222222222222
Q gi|254780916|r   88 TQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVV  129 (482)
Q Consensus        88 ~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~  129 (482)
T Consensus        80 a~~~~~d~v~gl~~GADDYl~KPf~~~EL~ARi~a~lRR~~~  121 (229)
T COG0745          80 ARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALLRRNAG  121 (229)
T ss_pred             CCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf             687288899999756342334889989999999999673656