HHsearch alignment for GI: 254780916 and conserved domain: COG0745
>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].
Probab=99.86 E-value=7.9e-21 Score=166.85 Aligned_cols=118 Identities=21% Similarity=0.279 Sum_probs=108.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH-CCCCCEEEEE
Q ss_conf 838998699899999999999889889998937--9999860899899997854698889999999985-7898399992
Q gi|254780916|r 11 KRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDK-IPIVPIIVQT 87 (482)
Q Consensus 11 ~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~-~p~ipvIiiT 87 (482)
T Consensus 1 ~~ILiveDd~~i~~~l~~~L~~~G~~v~~~~~~~~a~~~~~~~-~dlviLD~~lP~~dG~~~~~~iR~~~~~~~PIi~Lt 79 (229)
T COG0745 1 MRILLVEDDPELAELLKEYLEEEGYEVDVAADGEEALEAAREQ-PDLVLLDLMLPDLDGLELCRRLRAKKGSGPPIIVLT 79 (229)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC-CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 9899991888999999999987597899978989999997269-999999889998568999999985168999889996
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 689999999888505743222222222222222222222222
Q gi|254780916|r 88 TQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVV 129 (482)
Q Consensus 88 ~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~ 129 (482)
T Consensus 80 a~~~~~d~v~gl~~GADDYl~KPf~~~EL~ARi~a~lRR~~~ 121 (229)
T COG0745 80 ARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALLRRNAG 121 (229)
T ss_pred CCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 687288899999756342334889989999999999673656