HHsearch alignment for GI: 254780916 and conserved domain: COG0784
>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms].
Probab=99.55 E-value=1.1e-13 Score=116.45 Aligned_cols=113 Identities=19% Similarity=0.289 Sum_probs=98.7
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECC---HHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf 2883899869989999999999988988999893---799998608-998999978546988899999999857898399
Q gi|254780916|r 9 RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNV---SDLSTISKI-QVNVIFLSLINCEDDKENILKNIVDKIPIVPII 84 (482)
Q Consensus 9 ~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~---~al~~l~~~-~~dlillD~~mP~~dGlell~~i~~~~p~ipvI 84 (482)
T Consensus 4 ~~~~vLivdD~~~~~~~~~~~l~~~g~~v~~a~~~~~~al~~~~~~~~~dlii~D~~mp~~~G~~~~~~l~~~~~~~pvv 83 (130)
T COG0784 4 SGLRVLVVDDEPVNRRLLKRLLEDLGYEVVEAADGEEEALELLRELPQPDLILLDINMPGMDGIELLRRLRARGPNIPVI 83 (130)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
T ss_conf 88889997899999999999998779789995783999999986278999999806887888899999999718999689
Q ss_pred EEECCCCHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 9926899999998885057432222222222-222222
Q gi|254780916|r 85 VQTTQDNIKILNCFLYNRISKFFLNLVSRKQ-LCDSII 121 (482)
Q Consensus 85 iiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~-L~~~i~ 121 (482)
T Consensus 84 ~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~ 121 (130)
T COG0784 84 LLTAYADEADRERALAAGADDYLTKPIFLEEELLAALR 121 (130)
T ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
T ss_conf 99867867659999976876897589987999999999