HHsearch alignment for GI: 254780916 and conserved domain: COG1067
>COG1067 LonB Predicted ATP-dependent protease [Posttranslational modification, protein turnover, chaperones].
Probab=98.74 E-value=3.3e-08 Score=77.63 Aligned_cols=226 Identities=18% Similarity=0.204 Sum_probs=138.1
Q ss_pred CCCCCEEEEEEC----CCCCHHHHHHHHHHHC------CCC-CCCCCCCC---CCCCC--CCCCCHHHHHCCC--CCC--
Q ss_conf 344320488732----7774367999999842------675-43321012---34655--4210024331125--555--
Q gi|254780916|r 159 AGDCAIPIMIQG----EFGVGKKRLSRFIHES------GKR-AFFPFFIV---NCGMI--DQDKIEKFLFGDV--DLQ-- 218 (482)
Q Consensus 159 ~a~~~~~vli~G----e~GtGK~~~A~~iH~~------s~r-~~~~fi~v---~c~~~--~~~~~e~~lFG~~--~~~-- 218 (482)
T Consensus 127 ~~~~~~~~~~~~~~~~~~gv~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~p~v~a~~~~~~~LlG~Vr~~~~qG 206 (647)
T COG1067 127 LGPIEQQIILYGYNALLPGVLYAVAARIVLYEAKILKRSAVSVPKNFVELSPLDGAPVVFATGAIADQLLGSVRHDPYQG 206 (647)
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHCCEEEEECCCCC
T ss_conf 22466666540455346216778998888765312531033304556540235589679668777465361277768887
Q ss_pred ----CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC----------CCCCCCCEEEEECCCC
Q ss_conf ----32211100123446671475166420018899988887764200112355----------3212343156521433
Q gi|254780916|r 219 ----TKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSR----------GAIRLDVRLIFLTEKN 284 (482)
Q Consensus 219 ----~~~~~~~~g~~~~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~----------~~~~~~~RiIa~t~~~ 284 (482)
T Consensus 207 ~l~~~~~~~i~pGaVHkAngGVLiIdei~lL~~~~~w~~LKa~~~k~~~~~~~~~~s~~~~v~~e~vP~d~klI~~Gn~~ 286 (647)
T COG1067 207 GLGTTGHIRVKPGAVHKANGGVLIIDEIGLLAQPLQWKLLKALLDKEQPIWGSSEPSSGAPVRPESVPLDLKLILAGNRE 286 (647)
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHH
T ss_conf 66788864236761101258479997566328398999999998244566576740248615788855654899408899
Q ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---------C
Q ss_conf -211111123337999886543344677877442222556677764101122333321111100012233---------8
Q gi|254780916|r 285 -LLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYP---------W 354 (482)
Q Consensus 285 -L~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~---------W 354 (482)
T Consensus 287 ~l~~l~~~~~~r~~g~~y~ae~~~~m~---~~~~nr~k~~~~~~q~v~~d~~ip--~~~~~Av~~li~~a~R~Ag~~~~L 361 (647)
T COG1067 287 DLEDLHEPDRSRIEGFGYEAEFEDTMP---ITDANRSKLVQFYVQELARDGNIP--HLDKDAVEELIREAARRAGDQNKL 361 (647)
T ss_pred HHHHHCCCCHHHHHHCCEEEEECCCCC---CCHHHHHHHHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 997655347778840556899768889---986899999999999998628999--888899999999999861656502
Q ss_pred CCCHHHHHHHHHHHHHHCCC---CCCCHHHHHHHHCCC
Q ss_conf 98689999999999874389---810688954542124
Q gi|254780916|r 355 IDNVQELKNILLRAVIGLKD---SHLTEDRFVLLLSRE 389 (482)
Q Consensus 355 PGNvREL~n~i~r~~i~~~~---~~i~~~~~~~~l~~~ 389 (482)
T Consensus 362 tl~~rdl~~lv~~A~~ia~~~~~~~I~ae~Ve~a~~~~ 399 (647)
T COG1067 362 TLRLRDLGNLVREAGDIAVSEGRKLITAEDVEEALQKR 399 (647)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 14899999999986688853786647699999999874