HHsearch alignment for GI: 254780916 and conserved domain: COG1204

>COG1204 Superfamily II helicase [General function prediction only].
Probab=93.94  E-value=0.033  Score=35.20  Aligned_cols=105  Identities=14%  Similarity=0.130  Sum_probs=55.8

Q ss_pred             CCEEEECCCHHHHHHHHHH--HHHCCCEEEEE-CC-----------------HH-HHHHHCC------CCCEEEEE-CCC
Q ss_conf             8389986998999999999--99889889998-93-----------------79-9998608------99899997-854
Q gi|254780916|r   11 KRVLIIDKDDEQIKIIKDH--VESYGYDVFIV-NV-----------------SD-LSTISKI------QVNVIFLS-LIN   62 (482)
Q Consensus        11 ~rILIVDDd~~~~~~l~~~--L~~~G~~v~~a-~~-----------------~a-l~~l~~~------~~dlillD-~~m   62 (482)
T Consensus        78 k~vYivPlkALa~Ek~~~~~~~~~~GirV~~~TgD~~~~~~~l~~~~ViVtT~EK~Dsl~R~~~~~~~~V~lvViDEiH~  157 (766)
T COG1204          78 KVVYIVPLKALAEEKYEEFSRLEELGIRVGISTGDYDLDDERLARYDVIVTTPEKLDSLTRKRPSWIEEVDLVVIDEIHL  157 (766)
T ss_pred             CEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCEEEECHHHHHHHHHCCCCHHHCCCEEEEEEEEE
T ss_conf             38999075999999999866688659779996488655533414588799746786676506753334016899942101


Q ss_pred             CCCC-----HHHHHHHHHHHCCCCCEEEEECC-CCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             6988-----89999999985789839999268-99999998885057432222222222222
Q gi|254780916|r   63 CEDD-----KENILKNIVDKIPIVPIIVQTTQ-DNIKILNCFLYNRISKFFLNLVSRKQLCD  118 (482)
Q Consensus        63 P~~d-----Glell~~i~~~~p~ipvIiiT~~-~~~~~~~~a~~~g~~d~l~KP~~~~~L~~  118 (482)
T Consensus       158 l~d~~RG~~lE~iv~r~~~~~~~~rivgLSATlpN~~e--vA~wL~a~~~-~~~~rp~~l~~  216 (766)
T COG1204         158 LGDRTRGPVLESIVARMRRLNELIRIVGLSATLPNAEE--VADWLNAKLV-ESDWRPVPLRR  216 (766)
T ss_pred             CCCCCCCCEEHHHHHHHHHHCCCEEEEEEEEECCCHHH--HHHHHCCCCC-CCCCCCCCCCC
T ss_conf             48756586402279888852755179887311688899--9998588355-56778862015