HHsearch alignment for GI: 254780916 and conserved domain: COG1219

>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones].
Probab=98.07  E-value=7.2e-06  Score=61.10  Aligned_cols=96  Identities=22%  Similarity=0.267  Sum_probs=68.2

Q ss_pred             CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC---------CCCC
Q ss_conf             3443204887327774367999999842675433210123465542100243311255553221110---------0123
Q gi|254780916|r  159 AGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQF---------LGKF  229 (482)
Q Consensus       159 ~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~---------~g~~  229 (482)
T Consensus        93 vEL~KSNILLiGPTGsGKTlLAqTLAk~---LnVPFaiADATtLTEA-------GYV----GEDVENillkLlqaadydV  158 (408)
T COG1219          93 VELSKSNILLIGPTGSGKTLLAQTLAKI---LNVPFAIADATTLTEA-------GYV----GEDVENILLKLLQAADYDV  158 (408)
T ss_pred             EEEEECCEEEECCCCCCHHHHHHHHHHH---HCCCEEECCCCCHHHC-------CCC----CHHHHHHHHHHHHHCCCCH
T ss_conf             3532031799888997577999999998---4898475144412106-------635----5008999999998764588


Q ss_pred             CCCCCCEEEECCCCHHHH--------------HHHHHHHHHHHHH--HCCCCCCC
Q ss_conf             446671475166420018--------------8999888877642--00112355
Q gi|254780916|r  230 IEANGGTIVLEEPDALPL--------------AVQGRIYNFIETG--KIEFFDSR  268 (482)
Q Consensus       230 ~~a~~Gtl~l~ei~~L~~--------------~~Q~~Ll~~l~~~--~~~~~g~~  268 (482)
T Consensus       159 ~rAerGIIyIDEIDKIarkSen~SITRDVSGEGVQQALLKiiEGTvasVPPqGGR  213 (408)
T COG1219         159 ERAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKIIEGTVASVPPQGGR  213 (408)
T ss_pred             HHHHCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCC
T ss_conf             8882885998510254205789872343673589999999970751023999888