HHsearch alignment for GI: 254780916 and conserved domain: COG3947

>COG3947 Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms].

Probab=99.67  E-value=2.7e-16  Score=134.84  Aligned_cols=123  Identities=17%  Similarity=0.259  Sum_probs=107.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHHCCCEEEEECC--HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             83899869989999999999988988999893--7999986089989999785469888999999998578983999926
Q gi|254780916|r   11 KRVLIIDKDDEQIKIIKDHVESYGYDVFIVNV--SDLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQTT   88 (482)
Q Consensus        11 ~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~--~al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT~   88 (482)
T Consensus         1 ~~~iiVDdd~a~~~~l~~iLs~~~~~~~~~~~~~eal~~Le~~kpDLifldI~mp~~ngiefaeQvr~i~~~v~iifIss   80 (361)
T COG3947           1 PRIIIVDDDAAIVKLLSVILSRAGHEVRSCSHPVEALDLLEVFKPDLIFLDIVMPYMNGIEFAEQVRDIESAVPIIFISS   80 (361)
T ss_pred             CCEEEECCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             92799846389999999999861102100688788999998438877999852378608789999987531486899963


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             89999999888505743222222222222222222222222222221
Q gi|254780916|r   89 QDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVPSQENE  135 (482)
Q Consensus        89 ~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~~~~~~~  135 (482)
T Consensus        81 h~--eya~dsf~~n~~dYl~KPvt~ekLnraIdr~~k~ve~~~eee~  125 (361)
T COG3947          81 HA--EYADDSFGMNLDDYLPKPVTPEKLNRAIDRRLKRVELTAEEES  125 (361)
T ss_pred             CH--HHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHCC
T ss_conf             05--6523203556675416888888999999987402444410013