HHsearch alignment for GI: 254780916 and conserved domain: COG4753

>COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].

Probab=99.85  E-value=6.4e-21  Score=167.46  Aligned_cols=117  Identities=16%  Similarity=0.253  Sum_probs=106.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHH--HCCCEEE-EECC--HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf             8838998699899999999999--8898899-9893--799998608998999978546988899999999857898399
Q gi|254780916|r   10 HKRVLIIDKDDEQIKIIKDHVE--SYGYDVF-IVNV--SDLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPII   84 (482)
Q Consensus        10 ~~rILIVDDd~~~~~~l~~~L~--~~G~~v~-~a~~--~al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvI   84 (482)
T Consensus         1 MykVlIVDDE~lIr~GLk~lI~w~~~g~eiVgtA~NG~eAleli~e~~pDiviTDI~MP~mdGLdLI~~ike~~p~~~~I   80 (475)
T COG4753           1 MYKVLIVDDEPLIREGLKSLIDWEALGIEVVGTAANGKEALELIQETQPDIVITDINMPGMDGLDLIKAIKEQSPDTEFI   80 (475)
T ss_pred             CEEEEEECCHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf             91399966729999999984885636975787514579999998734997899815788875799999999749985399


Q ss_pred             EEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             992689999999888505743222222222222222222222
Q gi|254780916|r   85 VQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALRE  126 (482)
Q Consensus        85 iiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~  126 (482)
T Consensus        81 ILSGy~eFeYak~Am~lGV~dYLLKP~~k~eL~~~L~ki~~k  122 (475)
T COG4753          81 ILSGYDEFEYAKKAMKLGVKDYLLKPVDKAELEEALKKIIGK  122 (475)
T ss_pred             EEECCCHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHH
T ss_conf             984642058999998618521220769899999999999999