HHsearch alignment for GI: 254780916 and conserved domain: KOG0727

Probab=97.98  E-value=1e-05  Score=60.09  Aligned_cols=136  Identities=18%  Similarity=0.221  Sum_probs=84.3

Q ss_pred             CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC--
Q ss_conf             222222234432048873277743679999998426754332101234655421002433112555532211100123--
Q gi|254780916|r  152 VVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKF--  229 (482)
Q Consensus       152 v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~--  229 (482)
T Consensus       180 ly~qigi--dpprgvllygppg~gktml~kava~~t---~a~firvvgsefv-----qkylgegp-----rm-vrdvfrl  243 (408)
T KOG0727         180 LYKQIGI--DPPRGVLLYGPPGTGKTMLAKAVANHT---TAAFIRVVGSEFV-----QKYLGEGP-----RM-VRDVFRL  243 (408)
T ss_pred             HHHHHCC--CCCCCEEEECCCCCCHHHHHHHHHHCC---CHHEEEECCHHHH-----HHHHCCCC-----HH-HHHHHHH
T ss_conf             9997088--998622775799975789999986126---1114463018999-----99855483-----89-9999998


Q ss_pred             -CCCCCCEEEECCCCHH-----------HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC--C-CCCCCHHHH
Q ss_conf             -4466714751664200-----------188999888877642001123553212343156521433--2-111111233
Q gi|254780916|r  230 -IEANGGTIVLEEPDAL-----------PLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKN--L-LPQVKSHVF  294 (482)
Q Consensus       230 -~~a~~Gtl~l~ei~~L-----------~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~--L-~~~~~~g~f  294 (482)
T Consensus       244 akenapsiifideidaiatkrfdaqtgadrevqril~ellnqm-----dg-fdq~~nvkvimatnradtldpallrpgrl  317 (408)
T KOG0727         244 AKENAPSIIFIDEIDAIATKRFDAQTGADREVQRILIELLNQM-----DG-FDQTTNVKVIMATNRADTLDPALLRPGRL  317 (408)
T ss_pred             HHCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC-----CC-CCCCCCEEEEEECCCCCCCCHHHCCCCCC
T ss_conf             7616983798622456766412444463189999999999751-----47-67666558998327555668766287643


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3799988654334467787744222
Q gi|254780916|r  295 RKDLYYRISVFLINISTLRSRSEDI  319 (482)
Q Consensus       295 r~dLy~rL~~~~i~iPpLReR~eDI  319 (482)
T Consensus       318 dr---------kiefp-lpdrrqkr  332 (408)
T KOG0727         318 DR---------KIEFP-LPDRRQKR  332 (408)
T ss_pred             CC---------CCCCC-CCCHHHHH
T ss_conf             44---------43577-98546652