HHsearch alignment for GI: 254780916 and conserved domain: KOG0728
>KOG0728 consensus.
Probab=96.95 E-value=0.002 Score=43.86 Aligned_cols=168 Identities=17% Similarity=0.215 Sum_probs=91.4
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC---CCCEEE
Q ss_conf 32048873277743679999998426754332101234655421002433112555532211100123446---671475
Q gi|254780916|r 162 CAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEA---NGGTIV 238 (482)
Q Consensus 162 ~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~~~a---~~Gtl~ 238 (482)
T Consensus 180 QPKGvlLygppgtGktLlaraVahht~---c~firvsgselv-----qk~igeg-----srm-vrelfvmarehapsiif 245 (404)
T KOG0728 180 QPKGVLLYGPPGTGKTLLARAVAHHTD---CTFIRVSGSELV-----QKYIGEG-----SRM-VRELFVMAREHAPSIIF 245 (404)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHCC---EEEEEECHHHHH-----HHHHHHH-----HHH-HHHHHHHHHHCCCCEEE
T ss_conf 876048846999756299999875414---079996449999-----9985013-----899-99999998750882675
Q ss_pred ECCCCHH-----------HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC-C--CCCCCHHHHHHHHHHHHHH
Q ss_conf 1664200-----------188999888877642001123553212343156521433-2--1111112333799988654
Q gi|254780916|r 239 LEEPDAL-----------PLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKN-L--LPQVKSHVFRKDLYYRISV 304 (482)
Q Consensus 239 l~ei~~L-----------~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~-L--~~~~~~g~fr~dLy~rL~~ 304 (482)
T Consensus 246 mdeidsigs~r~e~~~ggdsevqrtmlellnql-----dgfe-atknikvimatnridild~allrpgridr-------- 311 (404)
T KOG0728 246 MDEIDSIGSSRVESGSGGDSEVQRTMLELLNQL-----DGFE-ATKNIKVIMATNRIDILDPALLRPGRIDR-------- 311 (404)
T ss_pred EHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-----CCCC-CCCCEEEEEECCCCCCCCHHHCCCCCCCC--------
T ss_conf 000012123434578986389999999999740-----2400-03662699841642224686638775455--------
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHH
Q ss_conf 3344677877-4422225566777641011223333211111000122338986-8999999999987
Q gi|254780916|r 305 FLINISTLRS-RSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDN-VQELKNILLRAVI 370 (482)
Q Consensus 305 ~~i~iPpLRe-R~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGN-vREL~n~i~r~~i 370 (482)
T Consensus 312 -kiefp~p~e~ar~~i-------lkihsrkmnl~-rgi~l~kia----ekm~gasgaevk~vcteagm 366 (404)
T KOG0728 312 -KIEFPPPNEEARLDI-------LKIHSRKMNLT-RGINLRKIA----EKMPGASGAEVKGVCTEAGM 366 (404)
T ss_pred -CCCCCCCCHHHHHHH-------HHHHHHHHHHH-CCCCHHHHH----HHCCCCCCCHHHHHHHHHHH
T ss_conf -564899877888789-------98855530133-066789999----86789863025434335457