HHsearch alignment for GI: 254780916 and conserved domain: KOG0989
>KOG0989 consensus.
Probab=97.80 E-value=0.00015 Score=51.85 Aligned_cols=208 Identities=17% Similarity=0.157 Sum_probs=112.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE-EEEECCCCCHHHHHHHHHHHCCCCCCCCC----CCCCCCCCCC-CCCH
Q ss_conf 1111111122222222222222223443204-88732777436799999984267543321----0123465542-1002
Q gi|254780916|r 135 EHCALDSLIAVSPAMIQVVDLARKAGDCAIP-IMIQGEFGVGKKRLSRFIHESGKRAFFPF----FIVNCGMIDQ-DKIE 208 (482)
Q Consensus 135 ~~~~~~~LiG~S~~m~~v~~~i~~~a~~~~~-vli~Ge~GtGK~~~A~~iH~~s~r~~~~f----i~v~c~~~~~-~~~e 208 (482)
T Consensus 31 rPkt~de~~gQe~vV~~L~~a~~~---~~lp~~LFyGPpGTGKTStalafar~L~~-~~~~~~rvl~lnaSderGisvvr 106 (346)
T KOG0989 31 RPKTFDELAGQEHVVQVLKNALLR---RILPHYLFYGPPGTGKTSTALAFARALNC-EQLFPCRVLELNASDERGISVVR 106 (346)
T ss_pred CCCCHHHHCCHHHHHHHHHHHHHH---CCCCEEEEECCCCCCHHHHHHHHHHHHCC-CCCCCCCHHHHCCCCCCCCCCHH
T ss_conf 787377650159999999999860---68860786689998676899999998557-42355542431366001431006
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 43311255553221110012344667147516642001889998888776420011235532123431565214332111
Q gi|254780916|r 209 KFLFGDVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQ 288 (482)
Q Consensus 209 ~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~ 288 (482)
T Consensus 107 ~Kik~fakl-~~~~~~~~~~~-~~~fKiiIlDEcdsmtsdaq~aLrr~mE~~-----------s~~trFiLIcnyl-sri 172 (346)
T KOG0989 107 EKIKNFAKL-TVLLKRSDGYP-CPPFKIIILDECDSMTSDAQAALRRTMEDF-----------SRTTRFILICNYL-SRI 172 (346)
T ss_pred HHHCCHHHH-HHCCCCCCCCC-CCCCEEEEEECHHHHHHHHHHHHHHHHHCC-----------CCCEEEEEECCCH-HHC
T ss_conf 652379987-50255656788-986328997416453099999999998625-----------4665999973885-647
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 11123337999886543344677877442222556677764101122333321111100012233898689999999999
Q gi|254780916|r 289 VKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRA 368 (482)
Q Consensus 289 ~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvREL~n~i~r~ 368 (482)
T Consensus 173 i------~pi~SRC~--KfrFk~L~d--~~iv~r----L~~Ia~~E~v---~~d~~al~~I~~~S-~GdLR~Ait~Lqsl 234 (346)
T KOG0989 173 I------RPLVSRCQ--KFRFKKLKD--EDIVDR----LEKIASKEGV---DIDDDALKLIAKIS-DGDLRRAITTLQSL 234 (346)
T ss_pred C------HHHHHHHH--HHCCCCCCH--HHHHHH----HHHHHHHHCC---CCCHHHHHHHHHHC-CCCHHHHHHHHHHH
T ss_conf 7------28774677--712887644--789999----9999888589---97878999999973-87289999999986
Q ss_pred HHHCCCCCCCHH
Q ss_conf 874389810688
Q gi|254780916|r 369 VIGLKDSHLTED 380 (482)
Q Consensus 369 ~i~~~~~~i~~~ 380 (482)
T Consensus 235 s~--~gk~It~~ 244 (346)
T KOG0989 235 SL--LGKRITTS 244 (346)
T ss_pred HC--CCCCCCHH
T ss_conf 10--47636458