HHsearch alignment for GI: 254780916 and conserved domain: KOG0989

>KOG0989 consensus.
Probab=97.80  E-value=0.00015  Score=51.85  Aligned_cols=208  Identities=17%  Similarity=0.157  Sum_probs=112.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE-EEEECCCCCHHHHHHHHHHHCCCCCCCCC----CCCCCCCCCC-CCCH
Q ss_conf             1111111122222222222222223443204-88732777436799999984267543321----0123465542-1002
Q gi|254780916|r  135 EHCALDSLIAVSPAMIQVVDLARKAGDCAIP-IMIQGEFGVGKKRLSRFIHESGKRAFFPF----FIVNCGMIDQ-DKIE  208 (482)
Q Consensus       135 ~~~~~~~LiG~S~~m~~v~~~i~~~a~~~~~-vli~Ge~GtGK~~~A~~iH~~s~r~~~~f----i~v~c~~~~~-~~~e  208 (482)
T Consensus        31 rPkt~de~~gQe~vV~~L~~a~~~---~~lp~~LFyGPpGTGKTStalafar~L~~-~~~~~~rvl~lnaSderGisvvr  106 (346)
T KOG0989          31 RPKTFDELAGQEHVVQVLKNALLR---RILPHYLFYGPPGTGKTSTALAFARALNC-EQLFPCRVLELNASDERGISVVR  106 (346)
T ss_pred             CCCCHHHHCCHHHHHHHHHHHHHH---CCCCEEEEECCCCCCHHHHHHHHHHHHCC-CCCCCCCHHHHCCCCCCCCCCHH
T ss_conf             787377650159999999999860---68860786689998676899999998557-42355542431366001431006


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf             43311255553221110012344667147516642001889998888776420011235532123431565214332111
Q gi|254780916|r  209 KFLFGDVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQ  288 (482)
Q Consensus       209 ~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~  288 (482)
T Consensus       107 ~Kik~fakl-~~~~~~~~~~~-~~~fKiiIlDEcdsmtsdaq~aLrr~mE~~-----------s~~trFiLIcnyl-sri  172 (346)
T KOG0989         107 EKIKNFAKL-TVLLKRSDGYP-CPPFKIIILDECDSMTSDAQAALRRTMEDF-----------SRTTRFILICNYL-SRI  172 (346)
T ss_pred             HHHCCHHHH-HHCCCCCCCCC-CCCCEEEEEECHHHHHHHHHHHHHHHHHCC-----------CCCEEEEEECCCH-HHC
T ss_conf             652379987-50255656788-986328997416453099999999998625-----------4665999973885-647


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             11123337999886543344677877442222556677764101122333321111100012233898689999999999
Q gi|254780916|r  289 VKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRA  368 (482)
Q Consensus       289 ~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvREL~n~i~r~  368 (482)
T Consensus       173 i------~pi~SRC~--KfrFk~L~d--~~iv~r----L~~Ia~~E~v---~~d~~al~~I~~~S-~GdLR~Ait~Lqsl  234 (346)
T KOG0989         173 I------RPLVSRCQ--KFRFKKLKD--EDIVDR----LEKIASKEGV---DIDDDALKLIAKIS-DGDLRRAITTLQSL  234 (346)
T ss_pred             C------HHHHHHHH--HHCCCCCCH--HHHHHH----HHHHHHHHCC---CCCHHHHHHHHHHC-CCCHHHHHHHHHHH
T ss_conf             7------28774677--712887644--789999----9999888589---97878999999973-87289999999986


Q ss_pred             HHHCCCCCCCHH
Q ss_conf             874389810688
Q gi|254780916|r  369 VIGLKDSHLTED  380 (482)
Q Consensus       369 ~i~~~~~~i~~~  380 (482)
T Consensus       235 s~--~gk~It~~  244 (346)
T KOG0989         235 SL--LGKRITTS  244 (346)
T ss_pred             HC--CCCCCCHH
T ss_conf             10--47636458