HHsearch alignment for GI: 254780916 and conserved domain: PRK00149
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed.
Probab=98.47 E-value=3.3e-07 Score=70.57 Aligned_cols=221 Identities=17% Similarity=0.232 Sum_probs=131.4
Q ss_pred CCCCCCCCCC-CCCCCC--CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCC
Q ss_conf 2211111111-222222--22222222223443204887327774367999999842675--433210123465542100
Q gi|254780916|r 133 ENEHCALDSL-IAVSPA--MIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKR--AFFPFFIVNCGMIDQDKI 207 (482)
Q Consensus 133 ~~~~~~~~~L-iG~S~~--m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r--~~~~fi~v~c~~~~~~~~ 207 (482)
T Consensus 112 Ln~~yTFdnFVvG~sN~lA~aAA~~Va~~pg~~yNPLfIyG~~GlGKTHLl~AIgn~~~~~~p~~~v~Y~ta-----e~F 186 (447)
T PRK00149 112 LNPKYTFDNFVVGKSNRLAHAAALAVAENPGKAYNPLFIYGGVGLGKTHLLHAIGNYILEKNPNAKVVYVSS-----EKF 186 (447)
T ss_pred CCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEH-----HHH
T ss_conf 885560326222698599999999998376767785589779988788999999999998589972899549-----999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH--HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 243311255553221110012344667147516642001--889998888776420011235532123431565214332
Q gi|254780916|r 208 EKFLFGDVDLQTKNSAQFLGKFIEANGGTIVLEEPDALP--LAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNL 285 (482)
Q Consensus 208 e~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl~l~ei~~L~--~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L 285 (482)
T Consensus 187 ~~~~v~al~--~~~~~~Fr~~yr~~--DvLliDDiqfl~gk~~tqeeff~~fn~l~----------~~~kqiv~tsd~~P 252 (447)
T PRK00149 187 TNDFVKALR--NNAMEEFKEKYRSV--DVLLIDDIQFLAGKEKTQEEFFHTFNALH----------ENNKQIVITSDRPP 252 (447)
T ss_pred HHHHHHHHH--CCCHHHHHHHHHCC--CEEEECHHHHHHCCHHHHHHHHHHHHHHH----------HCCCEEEEECCCCH
T ss_conf 999999985--18699999999728--85432148886055779999999999999----------84996899578896
Q ss_pred CCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 111111233379998865---43344677877442222556677764101122333321111100012233898689999
Q gi|254780916|r 286 LPQVKSHVFRKDLYYRIS---VFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELK 362 (482)
Q Consensus 286 ~~~~~~g~fr~dLy~rL~---~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvREL~ 362 (482)
T Consensus 253 ~~l~---~l~~rL~SRf~~Gl~~~i~~Pd~e~r~~--------Il~~k~~~~~~---~l~~~v~~~iA~-~~~~nvR~Le 317 (447)
T PRK00149 253 KELE---GLEDRLRSRFEWGLTVDIEPPDLETRVA--------ILQKKAEEEGI---NLPNEVLEFIAK-RIRSNIRELE 317 (447)
T ss_pred HHCC---CCCHHHHHHHHCCEEEECCCCCHHHHHH--------HHHHHHHHCCC---CCCHHHHHHHHH-HCCCCHHHHH
T ss_conf 7656---5117788676376265105999999999--------99999997289---999899999997-1268899999
Q ss_pred HHHHHHHHH--CCCCCCCHHHHHHHHC
Q ss_conf 999999874--3898106889545421
Q gi|254780916|r 363 NILLRAVIG--LKDSHLTEDRFVLLLS 387 (482)
Q Consensus 363 n~i~r~~i~--~~~~~i~~~~~~~~l~ 387 (482)
T Consensus 318 Gal~~l~a~~~~~~~~i~~~~~~~~l~ 344 (447)
T PRK00149 318 GALNRLVAYASLTGRPITLELAKEALK 344 (447)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 999999999998689999999999999