HHsearch alignment for GI: 254780916 and conserved domain: PRK05917
>PRK05917 DNA polymerase III subunit delta'; Validated.
Probab=94.65 E-value=0.055 Score=33.65 Aligned_cols=112 Identities=14% Similarity=0.089 Sum_probs=57.9
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 22222222222222344320488732777436799999984267543321--0123465542100243311255553221
Q gi|254780916|r 145 VSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPF--FIVNCGMIDQDKIEKFLFGDVDLQTKNS 222 (482)
Q Consensus 145 ~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~f--i~v~c~~~~~~~~e~~lFG~~~~~~~~~ 222 (482)
T Consensus 2 ~~~~We~L~~~i~~-~Rl~HAyLf~Gp~G~GK~~~A~~~A~~LLc~~~p~~~~~i~-~~~HPD~~~--i~pe~k~~~~~I 77 (290)
T PRK05917 2 ENAAWEALLQRVRD-QKVPSAILLHGQDLSNLSQYAYELASLILLESSPEAQYKIS-QKIHPDIHE--FFPEGKGRLHSI 77 (290)
T ss_pred CCHHHHHHHHHHHC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH-HCCCCCEEE--ECCCCCCCCCCH
T ss_conf 85499999999983-99660687689998659999999999985789961688987-468998599--615777887867
Q ss_pred CCCCCCCC-------CCCCCEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 11001234-------466714751664200188999888877642
Q gi|254780916|r 223 AQFLGKFI-------EANGGTIVLEEPDALPLAVQGRIYNFIETG 260 (482)
Q Consensus 223 ~~~~g~~~-------~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~ 260 (482)
T Consensus 78 d~iR~l~~~i~~~p~~g~~KV~IId~Ad~Mn~~AaNALLKtLEEP 122 (290)
T PRK05917 78 ETPRAIKKQIWIHPYEANYKIYIIHEADRMTLDAISAFLKVLEDP 122 (290)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCC
T ss_conf 899999999641864688269997567763899999999973479