HHsearch alignment for GI: 254780916 and conserved domain: PRK08116
>PRK08116 hypothetical protein; Validated.
Probab=97.80 E-value=1.9e-05 Score=58.07 Aligned_cols=139 Identities=19% Similarity=0.207 Sum_probs=78.0
Q ss_pred CCCCCCCCCCCCCC---CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHC-CCCCCCCCC
Q ss_conf 22222222222234---43204887327774367999999842675433210123465542100243311-255553221
Q gi|254780916|r 147 PAMIQVVDLARKAG---DCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFG-DVDLQTKNS 222 (482)
Q Consensus 147 ~~m~~v~~~i~~~a---~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG-~~~~~~~~~ 222 (482)
T Consensus 89 ~a~~~a~~Y~~~f~~~~~~~~GLll~G~~GtGKThLa~aIa~~l~~~g~~V~~~~~~----~ll-~~lk~~~~~~~~~~~ 163 (262)
T PRK08116 89 KAYKVAVKYVKKFEEMKKESVGLLLWGSPGNGKTYLAAAIANELIEKGVPVVFVNVP----ELL-NRIKSTYNSEGKEDE 163 (262)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH----HHH-HHHHHHHHCCCCHHH
T ss_conf 999999999998987364686189989899989999999999999879939998899----999-999999863561019
Q ss_pred CCCCCCCCCCCCCEEEECCCCH--HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 1100123446671475166420--01889998888776420011235532123431565214332111111233379998
Q gi|254780916|r 223 AQFLGKFIEANGGTIVLEEPDA--LPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYY 300 (482)
Q Consensus 223 ~~~~g~~~~a~~Gtl~l~ei~~--L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~~~~g~fr~dLy~ 300 (482)
T Consensus 164 ~e~l~~l~~--~dLLIiDDlG~e~~t~w~~e~lf~IIn~Ry-~---~~kp------tIiTTNl~~~eL~~--~~~~Ri~s 229 (262)
T PRK08116 164 NEIIRALDN--ADLLILDDLGAEKDTEWVREKLYNIIDSRY-R---KGLP------TIFTTNLSLEELKN--QYGKRTYS 229 (262)
T ss_pred HHHHHHHHC--CCEEEEEHHCCCCCCHHHHHHHHHHHHHHH-H---CCCC------EEEECCCCHHHHHH--HHHHHHHH
T ss_conf 999998612--998998322145698789999999999999-7---6999------89987999999999--86379999
Q ss_pred HHHH
Q ss_conf 8654
Q gi|254780916|r 301 RISV 304 (482)
Q Consensus 301 rL~~ 304 (482)
T Consensus 230 Rl~e 233 (262)
T PRK08116 230 RILE 233 (262)
T ss_pred HHHH
T ss_conf 9986