HHsearch alignment for GI: 254780916 and conserved domain: PRK08770

>PRK08770 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.07  E-value=0.00014  Score=52.04  Aligned_cols=222  Identities=14%  Similarity=0.155  Sum_probs=120.1

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCC-----CCCCCCCCCCCCCH
Q ss_conf             2111111112222222222222222344320488732777436799999984267543321-----01234655421002
Q gi|254780916|r  134 NEHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPF-----FIVNCGMIDQDKIE  208 (482)
Q Consensus       134 ~~~~~~~~LiG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~f-----i~v~c~~~~~~~~e  208 (482)
T Consensus        10 ~rp~~f~~~~gq~~~~~~l~~~~~~-~~~~~a~lf~g~rg~gkt~~ar~~a~~lnc~~~~~~~pc~~c~~c~~i~~~~~~   88 (663)
T PRK08770         10 WRPKRFAELVGQEHVVRALSNALDS-GRVHHAFLFTGTRGVGKTTIARIFAKSLNCETGTSADPCGQCPACLDIDAGRYI   88 (663)
T ss_pred             HCCCCHHHHCCCHHHHHHHHHHHHC-CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf             0887464522859999999999970-997404762279988888999999998678999999978778778988548988


Q ss_pred             HHHHCCCCCC-CCCCCCCCCCCCC-------CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
Q ss_conf             4331125555-3221110012344-------6671475166420018899988887764200112355321234315652
Q gi|254780916|r  209 KFLFGDVDLQ-TKNSAQFLGKFIE-------ANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFL  280 (482)
Q Consensus       209 ~~lFG~~~~~-~~~~~~~~g~~~~-------a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~  280 (482)
T Consensus        89 d~~--e~daas~~~v~~~r~~~~~~~~~p~~~~~kvy~idevhmls~~~fna~lktleep-----------p~~v~f~~a  155 (663)
T PRK08770         89 DLL--EIDAASNTGVDDVREVIENAQYMPSRGKFKVYLIDEVHMLSKAAFNALLKTLEEP-----------PEHVKFLLA  155 (663)
T ss_pred             CEE--EEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHCCC-----------CCCEEEEEE
T ss_conf             658--8646765888999999984435887774369997004332899999998740278-----------644289985


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             14332111111233379998865433446778774422225566777641011223333211111000122338986899
Q gi|254780916|r  281 TEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQE  360 (482)
Q Consensus       281 t~~~L~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvRE  360 (482)
T Consensus       156 tt~~-~k~p-~t~~src~~f~~~~--~~~-------~~---~~~~-l~~~~~~e~---~~~~~~~~~~~~~-~~~gs~rd  216 (663)
T PRK08770        156 TTDP-QKLP-VTVLSRCLQFNLKR--LDE-------DQ---IQGQ-MTRILAAEQ---IESDPSAIVQLSK-AADGSLRD  216 (663)
T ss_pred             CCCH-HHCC-HHHHHHHHHCCCCC--CCH-------HH---HHHH-HHHHHHHCC---CCCCHHHHHHHHH-HCCCCHHH
T ss_conf             4873-3374-89998887634377--999-------99---9999-999999839---9769999999999-74785677


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHCCC
Q ss_conf             99999999874389810688954542124
Q gi|254780916|r  361 LKNILLRAVIGLKDSHLTEDRFVLLLSRE  389 (482)
Q Consensus       361 L~n~i~r~~i~~~~~~i~~~~~~~~l~~~  389 (482)
T Consensus       217 ~lsl~~q~~~~~-~~~~~~~~v~~mlg~~  244 (663)
T PRK08770        217 GLSLLDQAIAYA-GGALREDVVRTMLGTV  244 (663)
T ss_pred             HHHHHHHHHHHC-CCCCCHHHHHHHHCCC
T ss_conf             888999999866-8976899999984888