HHsearch alignment for GI: 254780916 and conserved domain: PRK09191
>PRK09191 two-component response regulator; Provisional.
Probab=99.55 E-value=2.8e-14 Score=120.56 Aligned_cols=113 Identities=18% Similarity=0.139 Sum_probs=93.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCEEEE-ECC--HHHHHHHCCCCCEEEEECCCCC-CCHHHHHHHHHHHCCCCCEEE
Q ss_conf 883899869989999999999988988999-893--7999986089989999785469-888999999998578983999
Q gi|254780916|r 10 HKRVLIIDKDDEQIKIIKDHVESYGYDVFI-VNV--SDLSTISKIQVNVIFLSLINCE-DDKENILKNIVDKIPIVPIIV 85 (482)
Q Consensus 10 ~~rILIVDDd~~~~~~l~~~L~~~G~~v~~-a~~--~al~~l~~~~~dlillD~~mP~-~dGlell~~i~~~~p~ipvIi 85 (482)
T Consensus 137 ~~rILIVEDE~lIAmdLe~~l~~lG~~V~GiA~t~~eAl~la~~~~PDlvL~DI~L~d~~sGIdaa~~I~~~~-~iPvIF 215 (261)
T PRK09191 137 ATSVLIIEDEPIIAMDLEQLVESLGHRVVGIARTRAEAVALAKKTRPGLILADIQLADGSSGIDAVNDILKTF-DVPVIF 215 (261)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHC-CCCEEE
T ss_conf 7887998585999999999999879967876278999999974259898999534799987999999999828-999899
Q ss_pred EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9268999999988850574322222222222222222222
Q gi|254780916|r 86 QTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALR 125 (482)
Q Consensus 86 iT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~ 125 (482)
T Consensus 216 iTAyper--lltg~~~ep~~li~KPf~~~~v~aai~qAlf 253 (261)
T PRK09191 216 ITAFPER--LLTGERPEPAFLITKPFQPDTVKAAISQALF 253 (261)
T ss_pred ECCCHHH--HCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
T ss_conf 7778465--3027888874035698988999999999997