HHsearch alignment for GI: 254780916 and conserved domain: PRK09302
>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=92.21 E-value=0.52 Score=26.80 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=20.0
Q ss_pred CCCEEEEEECCCCCHHHHHHH-HHHHCCC
Q ss_conf 432048873277743679999-9984267
Q gi|254780916|r 161 DCAIPIMIQGEFGVGKKRLSR-FIHESGK 188 (482)
Q Consensus 161 ~~~~~vli~Ge~GtGK~~~A~-~iH~~s~ 188 (482)
T Consensus 264 ~~GsstLi~Gp~GtGKTtla~qFl~~~a~ 292 (501)
T PRK09302 264 FRGSIILVSGATGTGKTLLVSKFAEAACR 292 (501)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 58946999889998889999999999986