HHsearch alignment for GI: 254780916 and conserved domain: PRK09862
>PRK09862 putative ATP-dependent protease; Provisional.
Probab=98.63 E-value=4e-08 Score=77.07 Aligned_cols=133 Identities=15% Similarity=0.118 Sum_probs=93.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCC-------------------------C
Q ss_conf 111111222222222222222234432048873277743679999998426754-------------------------3
Q gi|254780916|r 137 CALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRA-------------------------F 191 (482)
Q Consensus 137 ~~~~~LiG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~-------------------------~ 191 (482)
T Consensus 188 ~D~~dv~Gq~~----akraleIAAAGgHnlLl~GpPG~GKTMlA~rlp~ILPpLt~~e~lEv~~I~Svag~~~~~~~~~~ 263 (506)
T PRK09862 188 HDLSDVVGQEQ----GKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQ 263 (506)
T ss_pred CCHHHHCCCHH----HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 67565369799----99999997446886598769994598999775123899898999999999987189877775466
Q ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC--CCCCCCC
Q ss_conf 32101234655421002433112555532211100123446671475166420018899988887764200--1123553
Q gi|254780916|r 192 FPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIETGKI--EFFDSRG 269 (482)
Q Consensus 192 ~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~--~~~g~~~ 269 (482)
T Consensus 264 rPfR~PHHs~-----S~~aliG------GG~~~~PGEISLAH~GVLFLDElpEF~r~vLe~LRqPLE~g~I~IsRa~~~~ 332 (506)
T PRK09862 264 RPFRSPHHSA-----SLTAMVG------GGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKI 332 (506)
T ss_pred CCEECCCCCC-----CHHHHHC------CCCCCCCCCEEECCCCEEEECCHHCCCHHHHHHHHHHHCCCEEEEEECCCEE
T ss_conf 8503788765-----4766637------9999999722213575788455000688899987762247759999668679
Q ss_pred CCCCCCEEEEECCCC
Q ss_conf 212343156521433
Q gi|254780916|r 270 AIRLDVRLIFLTEKN 284 (482)
Q Consensus 270 ~~~~~~RiIa~t~~~ 284 (482)
T Consensus 333 ~~PA~F~LVaAmNPC 347 (506)
T PRK09862 333 TYPARFQLVAAMNPS 347 (506)
T ss_pred EECCHHHHEHHCCCC
T ss_conf 861533111103788