HHsearch alignment for GI: 254780916 and conserved domain: PRK09958
>PRK09958 DNA-binding transcriptional activator EvgA; Provisional.
Probab=99.71 E-value=5.7e-17 Score=139.57 Aligned_cols=116 Identities=10% Similarity=0.121 Sum_probs=104.8
Q ss_pred CCEEEECCCHHHHHHHHHHHHHCCCEEEE-ECC--HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 83899869989999999999988988999-893--799998608998999978546988899999999857898399992
Q gi|254780916|r 11 KRVLIIDKDDEQIKIIKDHVESYGYDVFI-VNV--SDLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQT 87 (482)
Q Consensus 11 ~rILIVDDd~~~~~~l~~~L~~~G~~v~~-a~~--~al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT 87 (482)
T Consensus 1 m~vlivDDh~lvr~gl~~ll~~~~~~vv~~~~~~~~~l~~~~~~~pDvvllDl~lp~~~G~~~~~~ir~~~~~~~viv~s 80 (204)
T PRK09958 1 MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVS 80 (204)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEE
T ss_conf 98999869899999999999868998999979999999998743979999958999998416788898727980599997
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 689999999888505743222222222222222222222
Q gi|254780916|r 88 TQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALRE 126 (482)
Q Consensus 88 ~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~ 126 (482)
T Consensus 81 ~~~~~~~~~~a~~~Ga~g~l~K~~~~~~l~~aI~~v~~G 119 (204)
T PRK09958 81 AKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNG 119 (204)
T ss_pred CCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 246521144335268637997899999999999999779