HHsearch alignment for GI: 254780916 and conserved domain: PRK10365

>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=100.00  E-value=0  Score=878.64  Aligned_cols=435  Identities=28%  Similarity=0.449  Sum_probs=398.5

Q ss_pred             CC-CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCE
Q ss_conf             35-28838998699899999999999889889998937--9999860899899997854698889999999985789839
Q gi|254780916|r    7 LD-RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPI   83 (482)
Q Consensus         7 m~-~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipv   83 (482)
T Consensus         1 M~~~~~~ILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~~~al~~l~~~~~DlvllD~~mp~~~Gl~lL~~l~~~~p~~pv   80 (441)
T PRK10365          1 MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPV   80 (441)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCE
T ss_conf             99899859998398999999999999779989998999999999864899999988999999899999999842989828


Q ss_pred             EEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9992689999999888505743222222222222222222222222222--22111111112222222222222222344
Q gi|254780916|r   84 IVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVPSQ--ENEHCALDSLIAVSPAMIQVVDLARKAGD  161 (482)
Q Consensus        84 IiiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~~~~--~~~~~~~~~LiG~S~~m~~v~~~i~~~a~  161 (482)
T Consensus        81 IviT~~~~~~~av~A~k~GA~Dyl~KP~~~~~L~~~i~~al~~~~~~~~~~~~~~~~~~~liG~S~am~~v~~~i~~~A~  160 (441)
T PRK10365         81 LIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVSASQFGMVGKSPAMQHLLSEIALVAP  160 (441)
T ss_pred             EEEECCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEECCHHHHHHHHHHHHHHC
T ss_conf             99969999899999998285123407888999999999999999876520000122257866689999999999999848


Q ss_pred             CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC-CCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf             3204887327774367999999842675433210123465542100243311255-553221110012344667147516
Q gi|254780916|r  162 CAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVD-LQTKNSAQFLGKFIEANGGTIVLE  240 (482)
Q Consensus       162 ~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~-~~~~~~~~~~g~~~~a~~Gtl~l~  240 (482)
T Consensus       161 s~~pVLI~GE~GTGK~~~Ar~IH~~S~r~~~pfv~vnC~~l~~~l~eseLFG~~~gaftga~~~~~g~~~~A~gGTLfLd  240 (441)
T PRK10365        161 SEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLD  240 (441)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEECCC
T ss_conf             89948998999810999999999657877898079878989845558986177556878965346898778899825502


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             64200188999888877642001123553212343156521433211111123337999886543344677877442222
Q gi|254780916|r  241 EPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIP  320 (482)
Q Consensus       241 ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~  320 (482)
T Consensus       241 eI~~l~~~~Q~kLl~~l~~~~~~~~g~~~~~~~d~RiIaat~~~l~~~v~~g~Fr~dLy~rL~~~~i~lPpLReR~eDI~  320 (441)
T PRK10365        241 EIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIP  320 (441)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCHHHHHHCCCCHHHHHHHHCCHHCCCCCCCCCCCHHH
T ss_conf             31529999999999877752100058873441363799837889999988198258999886011137826000620099


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             55667776410112233332111110001223389868999999999987438981068895454212445432234322
Q gi|254780916|r  321 WLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVIGLKDSHLTEDRFVLLLSREGKKEREFHTET  400 (482)
Q Consensus       321 ~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvREL~n~i~r~~i~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~  400 (482)
T Consensus       321 ~L~~~fl~~~~~~~~~~~~~~s~~a~~~L~~y~WPGNvREL~n~iera~~~~~~~~i~~~~l~~~~~~~~~~~-------  393 (441)
T PRK10365        321 LLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPLAIASTPIPL-------  393 (441)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHCCCCCCC-------
T ss_conf             9999999999998499988889999999970999989999999999999957898688465754330688887-------


Q ss_pred             CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             22223344432100000000112344454325899999999999999982872789997848998899999998
Q gi|254780916|r  401 ACTCYTEGKSSDTILDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIRE  474 (482)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~E~~~I~~aL~~~~Gn~~~aA~~LGIsR~tL~rKlk~  474 (482)
T Consensus       394 --------------------------~~~~~~~~l~e~Er~~I~~aL~~~~gn~~~aA~~LGisR~tLyrKl~k  441 (441)
T PRK10365        394 --------------------------GQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR  441 (441)
T ss_pred             --------------------------CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCC
T ss_conf             --------------------------766565669999999999999993998999999978899999999674