HHsearch alignment for GI: 254780916 and conserved domain: PRK10365
>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=100.00 E-value=0 Score=878.64 Aligned_cols=435 Identities=28% Similarity=0.449 Sum_probs=398.5
Q ss_pred CC-CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCE
Q ss_conf 35-28838998699899999999999889889998937--9999860899899997854698889999999985789839
Q gi|254780916|r 7 LD-RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPI 83 (482)
Q Consensus 7 m~-~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipv 83 (482)
T Consensus 1 M~~~~~~ILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~~~al~~l~~~~~DlvllD~~mp~~~Gl~lL~~l~~~~p~~pv 80 (441)
T PRK10365 1 MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPV 80 (441)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCE
T ss_conf 99899859998398999999999999779989998999999999864899999988999999899999999842989828
Q ss_pred EEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9992689999999888505743222222222222222222222222222--22111111112222222222222222344
Q gi|254780916|r 84 IVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVPSQ--ENEHCALDSLIAVSPAMIQVVDLARKAGD 161 (482)
Q Consensus 84 IiiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~~~~--~~~~~~~~~LiG~S~~m~~v~~~i~~~a~ 161 (482)
T Consensus 81 IviT~~~~~~~av~A~k~GA~Dyl~KP~~~~~L~~~i~~al~~~~~~~~~~~~~~~~~~~liG~S~am~~v~~~i~~~A~ 160 (441)
T PRK10365 81 LIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVSASQFGMVGKSPAMQHLLSEIALVAP 160 (441)
T ss_pred EEEECCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEECCHHHHHHHHHHHHHHC
T ss_conf 99969999899999998285123407888999999999999999876520000122257866689999999999999848
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC-CCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 3204887327774367999999842675433210123465542100243311255-553221110012344667147516
Q gi|254780916|r 162 CAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVD-LQTKNSAQFLGKFIEANGGTIVLE 240 (482)
Q Consensus 162 ~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~-~~~~~~~~~~g~~~~a~~Gtl~l~ 240 (482)
T Consensus 161 s~~pVLI~GE~GTGK~~~Ar~IH~~S~r~~~pfv~vnC~~l~~~l~eseLFG~~~gaftga~~~~~g~~~~A~gGTLfLd 240 (441)
T PRK10365 161 SEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLD 240 (441)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEECCC
T ss_conf 89948998999810999999999657877898079878989845558986177556878965346898778899825502
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64200188999888877642001123553212343156521433211111123337999886543344677877442222
Q gi|254780916|r 241 EPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIP 320 (482)
Q Consensus 241 ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~ 320 (482)
T Consensus 241 eI~~l~~~~Q~kLl~~l~~~~~~~~g~~~~~~~d~RiIaat~~~l~~~v~~g~Fr~dLy~rL~~~~i~lPpLReR~eDI~ 320 (441)
T PRK10365 241 EIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIP 320 (441)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCCHHHHHHCCCCHHHHHHHHCCHHCCCCCCCCCCCHHH
T ss_conf 31529999999999877752100058873441363799837889999988198258999886011137826000620099
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 55667776410112233332111110001223389868999999999987438981068895454212445432234322
Q gi|254780916|r 321 WLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVIGLKDSHLTEDRFVLLLSREGKKEREFHTET 400 (482)
Q Consensus 321 ~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvREL~n~i~r~~i~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~ 400 (482)
T Consensus 321 ~L~~~fl~~~~~~~~~~~~~~s~~a~~~L~~y~WPGNvREL~n~iera~~~~~~~~i~~~~l~~~~~~~~~~~------- 393 (441)
T PRK10365 321 LLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPLAIASTPIPL------- 393 (441)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHCCCCCCC-------
T ss_conf 9999999999998499988889999999970999989999999999999957898688465754330688887-------
Q ss_pred CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 22223344432100000000112344454325899999999999999982872789997848998899999998
Q gi|254780916|r 401 ACTCYTEGKSSDTILDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIRE 474 (482)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~E~~~I~~aL~~~~Gn~~~aA~~LGIsR~tL~rKlk~ 474 (482)
T Consensus 394 --------------------------~~~~~~~~l~e~Er~~I~~aL~~~~gn~~~aA~~LGisR~tLyrKl~k 441 (441)
T PRK10365 394 --------------------------GQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR 441 (441)
T ss_pred --------------------------CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCC
T ss_conf --------------------------766565669999999999999993998999999978899999999674