HHsearch alignment for GI: 254780916 and conserved domain: PRK10403
>PRK10403 transcriptional regulator NarP; Provisional.
Probab=99.73 E-value=1.9e-17 Score=142.88 Aligned_cols=120 Identities=17% Similarity=0.191 Sum_probs=106.7
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHH-CCCEEE-EECC--HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 35288389986998999999999998-898899-9893--7999986089989999785469888999999998578983
Q gi|254780916|r 7 LDRHKRVLIIDKDDEQIKIIKDHVES-YGYDVF-IVNV--SDLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVP 82 (482)
Q Consensus 7 m~~~~rILIVDDd~~~~~~l~~~L~~-~G~~v~-~a~~--~al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ip 82 (482)
T Consensus 3 ~~~pirIlIvDD~~l~r~gl~~~L~~~~~~~vv~~a~~~~~~~~~~~~~~pDlvllD~~lp~~~G~~~~~~l~~~~p~~~ 82 (215)
T PRK10403 3 EATPFQVLIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQ 82 (215)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCC
T ss_conf 89975799983989999999999975899289999899999999986449989998089989987412335654188773
Q ss_pred EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99992689999999888505743222222222222222222222
Q gi|254780916|r 83 IIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALRE 126 (482)
Q Consensus 83 vIiiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~ 126 (482)
T Consensus 83 iivlt~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~G 126 (215)
T PRK10403 83 IIILTVSDASSDIFALIDAGADGYLLKDSDPEVLLEAIRAGAKG 126 (215)
T ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 68863243236789987468766884899999999999999849