HHsearch alignment for GI: 254780916 and conserved domain: PRK10610
>PRK10610 chemotaxis regulatory protein CheY; Provisional.
Probab=99.88 E-value=4.6e-22 Score=175.58 Aligned_cols=121 Identities=12% Similarity=0.186 Sum_probs=110.1
Q ss_pred CC-CCCCEEEECCCHHHHHHHHHHHHHCCC-EEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH--CCC
Q ss_conf 35-288389986998999999999998898-89998937--9999860899899997854698889999999985--789
Q gi|254780916|r 7 LD-RHKRVLIIDKDDEQIKIIKDHVESYGY-DVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDK--IPI 80 (482)
Q Consensus 7 m~-~~~rILIVDDd~~~~~~l~~~L~~~G~-~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~--~p~ 80 (482)
T Consensus 1 m~~k~lrILivDD~~~~r~~l~~~L~~~g~~~v~~a~~g~~al~~~~~~~~Dlil~D~~MP~~dG~el~~~ir~~~~~~~ 80 (129)
T PRK10610 1 MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFVISDWNMPNMDGLELLKTIRADGAMSA 80 (129)
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 98999899999798999999999999869978999899999999998589999998189999989999999985777789
Q ss_pred CCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 83999926899999998885057432222222222222222222222
Q gi|254780916|r 81 VPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREG 127 (482)
Q Consensus 81 ipvIiiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~ 127 (482)
T Consensus 81 ~Pii~~T~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~vl~r~ 127 (129)
T PRK10610 81 LPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKL 127 (129)
T ss_pred CCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 96899988689999999998699889989899999999999999763