HHsearch alignment for GI: 254780916 and conserved domain: PRK10651
>PRK10651 transcriptional regulator NarL; Provisional.
Probab=99.72 E-value=1.6e-17 Score=143.56 Aligned_cols=121 Identities=13% Similarity=0.101 Sum_probs=107.9
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHC-CCEEE-EECC--HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 352883899869989999999999988-98899-9893--7999986089989999785469888999999998578983
Q gi|254780916|r 7 LDRHKRVLIIDKDDEQIKIIKDHVESY-GYDVF-IVNV--SDLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVP 82 (482)
Q Consensus 7 m~~~~rILIVDDd~~~~~~l~~~L~~~-G~~v~-~a~~--~al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ip 82 (482)
T Consensus 3 ~~~pirVlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~ea~~~~~~~~pDlvllDl~lp~~~G~~~~~~l~~~~~~~~ 82 (216)
T PRK10651 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGR 82 (216)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99997899983999999999999975899389999899999999987079999999599999888764232334578874
Q ss_pred EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999926899999998885057432222222222222222222222
Q gi|254780916|r 83 IIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREG 127 (482)
Q Consensus 83 vIiiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~ 127 (482)
T Consensus 83 iivlt~~~~~~~~~~al~~Ga~gyl~K~~~~~~L~~ai~~v~~g~ 127 (216)
T PRK10651 83 IVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 (216)
T ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
T ss_conf 676305541889999996698789837899999999999998599