HHsearch alignment for GI: 254780916 and conserved domain: PRK10766
>PRK10766 DNA-binding transcriptional regulator TorR; Provisional.
Probab=99.86 E-value=1.7e-21 Score=171.62 Aligned_cols=119 Identities=13% Similarity=0.107 Sum_probs=109.6
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 8838998699899999999999889889998937--99998608998999978546988899999999857898399992
Q gi|254780916|r 10 HKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQT 87 (482)
Q Consensus 10 ~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT 87 (482)
T Consensus 2 ~~kILlVEDD~~l~~~l~~~L~~~g~~V~~~~~~~~a~~~l~~~~~DlvilDi~lp~~~G~el~~~iR~~~-~~piI~lt 80 (224)
T PRK10766 2 SYHILVVEDEPVTRARLQGYFEQEGYRVSEAASGAGMREIMQNQHVDLILLDINLPGEDGLMLTRELRSRS-TVGIILVT 80 (224)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCC-CCCEEEEC
T ss_conf 97199991999999999999998799999989999999999608999999889999887661376763047-85568633
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 689999999888505743222222222222222222222222
Q gi|254780916|r 88 TQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVV 129 (482)
Q Consensus 88 ~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~ 129 (482)
T Consensus 81 a~~~~~~~i~al~~GaddYl~KPf~~~eL~ari~allrR~~~ 122 (224)
T PRK10766 81 GRTDSIDRIVGLEMGADDYVTKPFELRELLVRVKNLLWRISL 122 (224)
T ss_pred CCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 558989999999849414513999889999999999725244