HHsearch alignment for GI: 254780916 and conserved domain: PRK10766

>PRK10766 DNA-binding transcriptional regulator TorR; Provisional.
Probab=99.86  E-value=1.7e-21  Score=171.62  Aligned_cols=119  Identities=13%  Similarity=0.107  Sum_probs=109.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             8838998699899999999999889889998937--99998608998999978546988899999999857898399992
Q gi|254780916|r   10 HKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQT   87 (482)
Q Consensus        10 ~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT   87 (482)
T Consensus         2 ~~kILlVEDD~~l~~~l~~~L~~~g~~V~~~~~~~~a~~~l~~~~~DlvilDi~lp~~~G~el~~~iR~~~-~~piI~lt   80 (224)
T PRK10766          2 SYHILVVEDEPVTRARLQGYFEQEGYRVSEAASGAGMREIMQNQHVDLILLDINLPGEDGLMLTRELRSRS-TVGIILVT   80 (224)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCC-CCCEEEEC
T ss_conf             97199991999999999999998799999989999999999608999999889999887661376763047-85568633


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             689999999888505743222222222222222222222222
Q gi|254780916|r   88 TQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVV  129 (482)
Q Consensus        88 ~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~  129 (482)
T Consensus        81 a~~~~~~~i~al~~GaddYl~KPf~~~eL~ari~allrR~~~  122 (224)
T PRK10766         81 GRTDSIDRIVGLEMGADDYVTKPFELRELLVRVKNLLWRISL  122 (224)
T ss_pred             CCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             558989999999849414513999889999999999725244