HHsearch alignment for GI: 254780916 and conserved domain: PRK10816

>PRK10816 DNA-binding transcriptional regulator PhoP; Provisional.
Probab=99.86  E-value=2.8e-21  Score=170.02  Aligned_cols=117  Identities=12%  Similarity=0.138  Sum_probs=110.9

Q ss_pred             CCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             838998699899999999999889889998937--999986089989999785469888999999998578983999926
Q gi|254780916|r   11 KRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQTT   88 (482)
Q Consensus        11 ~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT~   88 (482)
T Consensus         1 mkILivEdd~~~~~~l~~~L~~~g~~V~~a~~~~~al~~~~~~~~dlvilD~~lp~~~G~~l~~~ir~~~~~~piI~lta   80 (223)
T PRK10816          1 MRVLVVEDNALLRHHLKVQLQDAGHQVDAAEDAKEADYYLNEHLPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTA   80 (223)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEEC
T ss_conf             98999959899999999999978999999899999999997579989999799989886400120110489876899944


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             899999998885057432222222222222222222222
Q gi|254780916|r   89 QDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREG  127 (482)
Q Consensus        89 ~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~  127 (482)
T Consensus        81 ~~~~~~~~~al~~Gaddyl~KP~~~~eL~arv~~~lrr~  119 (223)
T PRK10816         81 RESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRN  119 (223)
T ss_pred             CCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCC
T ss_conf             456778999998699886418977789999999996655