HHsearch alignment for GI: 254780916 and conserved domain: PRK10840

>PRK10840 transcriptional regulator RcsB; Provisional.
Probab=99.62  E-value=5.2e-15  Score=125.73  Aligned_cols=116  Identities=22%  Similarity=0.235  Sum_probs=102.8

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHC-CCEEEE-ECCH--HHHHHHCCCCCEEEEECCCCC---CCHHHHHHHHHHHCCCCC
Q ss_conf             883899869989999999999988-988999-8937--999986089989999785469---888999999998578983
Q gi|254780916|r   10 HKRVLIIDKDDEQIKIIKDHVESY-GYDVFI-VNVS--DLSTISKIQVNVIFLSLINCE---DDKENILKNIVDKIPIVP   82 (482)
Q Consensus        10 ~~rILIVDDd~~~~~~l~~~L~~~-G~~v~~-a~~~--al~~l~~~~~dlillD~~mP~---~dGlell~~i~~~~p~ip   82 (482)
T Consensus         3 ~irIlIvDDh~lvr~Gl~~~L~~~~~~~vvg~a~~~~~~~~~~~~~~pDvvllDl~mpg~~~~dGl~~~~~i~~~~p~~~   82 (216)
T PRK10840          3 NMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLS   82 (216)
T ss_pred             CCEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCE
T ss_conf             88899988979999999999815999689998799999999986239898998267799988789999999998589980


Q ss_pred             EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9999268999999988850574322222222222222222222
Q gi|254780916|r   83 IIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALR  125 (482)
Q Consensus        83 vIiiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~  125 (482)
T Consensus        83 vivls~~~~~~~v~~al~~Ga~Gyl~K~~~~~~L~~AI~~v~~  125 (216)
T PRK10840         83 IIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK  125 (216)
T ss_pred             EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf             8998477878999999858974899878999999999999987