HHsearch alignment for GI: 254780916 and conserved domain: PRK10841

>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.

Probab=99.85  E-value=2.2e-20  Score=163.74  Aligned_cols=116  Identities=16%  Similarity=0.184  Sum_probs=107.5

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             28838998699899999999999889889998937--9999860899899997854698889999999985789839999
Q gi|254780916|r    9 RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQ   86 (482)
Q Consensus         9 ~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIii   86 (482)
T Consensus       823 ~~lrILVVEDNpINq~VL~~~L~~LG~~V~~A~NG~EALe~l~~~~fDLILMDIqMPvMDGyEaTr~IRe~~~~iPIIAL  902 (947)
T PRK10841        823 DDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGV  902 (947)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEE
T ss_conf             89889999078999999999999769999998999999999756998989970888998099999999808984949999


Q ss_pred             ECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             26899999998885057432222222222222222222
Q gi|254780916|r   87 TTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICAL  124 (482)
Q Consensus        87 T~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al  124 (482)
T Consensus       903 TAnA~~edkerCleAGMDdyLsKPV~l~~L~~vL~~Y~  940 (947)
T PRK10841        903 TANALAEEKQRCLEAGMDSCLSKPVTLDVLKQTLTVYA  940 (947)
T ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf             38999899999998799999979897999999999998