HHsearch alignment for GI: 254780916 and conserved domain: PRK11107

>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=99.84  E-value=5.2e-20  Score=161.05  Aligned_cols=115  Identities=14%  Similarity=0.141  Sum_probs=105.3

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCCEEE
Q ss_conf             8838998699899999999999889889998937--9999860899899997854698889999999985--78983999
Q gi|254780916|r   10 HKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDK--IPIVPIIV   85 (482)
Q Consensus        10 ~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~--~p~ipvIi   85 (482)
T Consensus       668 ~lrVLvVEDN~iN~~vi~~lL~~lG~~v~~A~nG~eAle~~~~~~fDLILMDiqMP~MDG~eATr~IR~~~~~~~~PIIA  747 (920)
T PRK11107        668 PLTVMAVDDNPANLKLIGALLEEQVEHVVLCDSGHQAVELAKQRPFDLIFMDIQMPGMDGIRACELIRQLPHNQNTPIIA  747 (920)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf             77499984889999999999998498899989999999997479997899889999998999999998186789895999


Q ss_pred             EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             926899999998885057432222222222222222222
Q gi|254780916|r   86 QTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICAL  124 (482)
Q Consensus        86 iT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al  124 (482)
T Consensus       748 lTA~a~~~dre~cl~aGMddyLtKPI~~~~L~~~L~~~~  786 (920)
T PRK11107        748 VTAHAMAGERERLLGAGMDDYLAKPIDEAALKQVLLRWK  786 (920)
T ss_pred             EECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHC
T ss_conf             979989899999997799938728799999999999867