HHsearch alignment for GI: 254780916 and conserved domain: PRK11107
>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=99.84 E-value=5.2e-20 Score=161.05 Aligned_cols=115 Identities=14% Similarity=0.141 Sum_probs=105.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCCEEE
Q ss_conf 8838998699899999999999889889998937--9999860899899997854698889999999985--78983999
Q gi|254780916|r 10 HKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDK--IPIVPIIV 85 (482)
Q Consensus 10 ~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~--~p~ipvIi 85 (482)
T Consensus 668 ~lrVLvVEDN~iN~~vi~~lL~~lG~~v~~A~nG~eAle~~~~~~fDLILMDiqMP~MDG~eATr~IR~~~~~~~~PIIA 747 (920)
T PRK11107 668 PLTVMAVDDNPANLKLIGALLEEQVEHVVLCDSGHQAVELAKQRPFDLIFMDIQMPGMDGIRACELIRQLPHNQNTPIIA 747 (920)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf 77499984889999999999998498899989999999997479997899889999998999999998186789895999
Q ss_pred EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 926899999998885057432222222222222222222
Q gi|254780916|r 86 QTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICAL 124 (482)
Q Consensus 86 iT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al 124 (482)
T Consensus 748 lTA~a~~~dre~cl~aGMddyLtKPI~~~~L~~~L~~~~ 786 (920)
T PRK11107 748 VTAHAMAGERERLLGAGMDDYLAKPIDEAALKQVLLRWK 786 (920)
T ss_pred EECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHC
T ss_conf 979989899999997799938728799999999999867