HHsearch alignment for GI: 254780916 and conserved domain: PRK11331

Probab=94.72  E-value=0.25  Score=28.99  Aligned_cols=121  Identities=22%  Similarity=0.220  Sum_probs=67.6

Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC----CCC--
Q ss_conf             43204887327774367999999842--6754332101234655421002433112555532211100123----446--
Q gi|254780916|r  161 DCAIPIMIQGEFGVGKKRLSRFIHES--GKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKF----IEA--  232 (482)
Q Consensus       161 ~~~~~vli~Ge~GtGK~~~A~~iH~~--s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~----~~a--  232 (482)
T Consensus       192 ktKknvIL~G~pGtGKT~lAk~lA~~l~g~~~~~rv~~Vqfh--psysYEDfi~Gyrp~~-~gf~~~~G~f~~~~~~A~~  268 (459)
T PRK11331        192 TIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFH--QSYSYEDFIQGYRPNG-VGFRRKDGIFYNFCQQAKE  268 (459)
T ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEC--CCCCHHHHHCCCCCCC-CCCEECCCHHHHHHHHHHH
T ss_conf             458827965899988789999999997078877846899835--8866178764605688-8613268369999999984


Q ss_pred             ---CCCEEEECCCCHHHHH-HHHHHHHHHHHHHC------CC---C--CCCCCCCCCCEEEEECCCC
Q ss_conf             ---6714751664200188-99988887764200------11---2--3553212343156521433
Q gi|254780916|r  233 ---NGGTIVLEEPDALPLA-VQGRIYNFIETGKI------EF---F--DSRGAIRLDVRLIFLTEKN  284 (482)
Q Consensus       233 ---~~Gtl~l~ei~~L~~~-~Q~~Ll~~l~~~~~------~~---~--g~~~~~~~~~RiIa~t~~~  284 (482)
T Consensus       269 ~p~~~y~~iideinr~~~~~~fgel~~liE~dkR~~~~~~~l~ys~~~~~~f~vP~Nl~iigtmNta  335 (459)
T PRK11331        269 QPEKKYVFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTA  335 (459)
T ss_pred             CCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEECCCCCEEEEEECCCC
T ss_conf             9898769998432033889999999999641256765225630036888533468865999850334