HHsearch alignment for GI: 254780916 and conserved domain: PRK12422

>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=98.40  E-value=6.6e-07  Score=68.42  Aligned_cols=220  Identities=16%  Similarity=0.168  Sum_probs=125.8

Q ss_pred             CCCCCCCCCC-CCCCCCCCC--CCCCCCCCCC----CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2211111111-222222222--2222222344----32048873277743679999998426754332101234655421
Q gi|254780916|r  133 ENEHCALDSL-IAVSPAMIQ--VVDLARKAGD----CAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQD  205 (482)
Q Consensus       133 ~~~~~~~~~L-iG~S~~m~~--v~~~i~~~a~----~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~  205 (482)
T Consensus       104 lNp~ytFd~FVvG~~N~lA~~aa~~va~~~~~~~g~~yNPLfIyG~~GlGKTHLL~AIgn~i~~~~~kV~Yv-----tae  178 (455)
T PRK12422        104 VDPEMTFANFLVTPENDLPFRILQEFAKVSEQGKGFPFNPIYLFGPEGSGKTHLMQAAVSALRESGGKILYV-----SSE  178 (455)
T ss_pred             CCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE-----CHH
T ss_conf             897783558331586099999999998375535887678758878999978999999999853799869997-----499


Q ss_pred             CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHH--HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC
Q ss_conf             002433112555532211100123446671475166420018--899988887764200112355321234315652143
Q gi|254780916|r  206 KIEKFLFGDVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPL--AVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEK  283 (482)
Q Consensus       206 ~~e~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl~l~ei~~L~~--~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~  283 (482)
T Consensus       179 ~F~~~~v~ai~--~~~~~~Fr~~yr~~--DvLLIDDIQfl~gK~~tqeEff~tfN~L~----------~~~KQIVitsDr  244 (455)
T PRK12422        179 LFTEHLVSAIR--SGEMQRFRSFYRNV--DALFIEDIEVFSGKGATQEEFFHTFNSLH----------TEGKLIVISSSY  244 (455)
T ss_pred             HHHHHHHHHHH--CCCHHHHHHHHHCC--CEEEEEHHHHHHCCHHHHHHHHHHHHHHH----------HCCCEEEEECCC
T ss_conf             99999999997--58899999999638--87763147887284889999999999999----------859969996898


Q ss_pred             CCCCCCCHHHHHHHHHHHHH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             32111111233379998865-43--3446778774422225566777641011223333211111000122338986899
Q gi|254780916|r  284 NLLPQVKSHVFRKDLYYRIS-VF--LINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQE  360 (482)
Q Consensus       284 ~L~~~~~~g~fr~dLy~rL~-~~--~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvRE  360 (482)
T Consensus       245 ~P~el~---~l~~RL~SRf~~GL~v~I~~Pd~etr~~--------Il~~k~~~~~~---~l~~ev~~~i-A~~i~~niRe  309 (455)
T PRK12422        245 APGDLK---AMEERLISRFEWGIAIPIHPLTREGLRS--------FLMRQAEQLSI---RIEETALDFL-IQALSSNVKT  309 (455)
T ss_pred             CHHHHH---HHHHHHHHHHHCCEEECCCCCCHHHHHH--------HHHHHHHHCCC---CCCHHHHHHH-HHHHHHHHHH
T ss_conf             957651---2689999886376132168999899999--------99999987188---8844689999-9997551799


Q ss_pred             HHHHHHHHHHH-----CCCCCCCHHHHHHHH
Q ss_conf             99999999874-----389810688954542
Q gi|254780916|r  361 LKNILLRAVIG-----LKDSHLTEDRFVLLL  386 (482)
Q Consensus       361 L~n~i~r~~i~-----~~~~~i~~~~~~~~l  386 (482)
T Consensus       310 LeGal~~l~~~~~~~~~~~~~i~~~~~~~~l  340 (455)
T PRK12422        310 LLHALTLLAKRVAYKKLSHQLLYEDDIKALL  340 (455)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf             9999999999999871568836499999999