HHsearch alignment for GI: 254780916 and conserved domain: PRK13557

>PRK13557 histidine kinase; Provisional.
Probab=99.86  E-value=6.1e-21  Score=167.61  Aligned_cols=118  Identities=14%  Similarity=0.235  Sum_probs=107.5

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCC-CCCEEEEECCCC-CCCHHHHHHHHHHHCCCCCEE
Q ss_conf             28838998699899999999999889889998937--99998608-998999978546-988899999999857898399
Q gi|254780916|r    9 RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKI-QVNVIFLSLINC-EDDKENILKNIVDKIPIVPII   84 (482)
Q Consensus         9 ~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~-~~dlillD~~mP-~~dGlell~~i~~~~p~ipvI   84 (482)
T Consensus       412 ~~~~ILvVDD~~~~r~~~~~~L~~~G~~v~~a~~G~eAl~~l~~~~~~Dlvl~D~~MPg~mdG~el~r~ir~~~p~i~ii  491 (538)
T PRK13557        412 GTETILIVDDRPDVAELARMILEDFGYRTLVASNGREALEILESHPEVDLLFTDLIMPGGMNGVMLAREARRRQPKIKVL  491 (538)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf             87258996798999999999999769999998999999999960999889988777999988999999998538998399


Q ss_pred             EEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             992689999999888505743222222222222222222222
Q gi|254780916|r   85 VQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALRE  126 (482)
Q Consensus        85 iiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~  126 (482)
T Consensus       492 ~~Tg~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~  533 (538)
T PRK13557        492 LTTGYAEASIERTDVGGSEFDIVNKPYRRAELARRVRMVLDG  533 (538)
T ss_pred             EEECCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCC
T ss_conf             997998778899775289988881989999999999998678