HHsearch alignment for GI: 254780916 and conserved domain: PRK13837

>PRK13837 two-component VirA-like sensor kinase; Provisional.
Probab=99.72  E-value=1.1e-16  Score=137.63  Aligned_cols=120  Identities=17%  Similarity=0.262  Sum_probs=106.6

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCC--CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf             28838998699899999999999889889998937--99998608--998999978546988899999999857898399
Q gi|254780916|r    9 RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKI--QVNVIFLSLINCEDDKENILKNIVDKIPIVPII   84 (482)
Q Consensus         9 ~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~--~~dlillD~~mP~~dGlell~~i~~~~p~ipvI   84 (482)
T Consensus       698 ~ge~ILvVdDe~~vr~~~~~~L~~lGY~v~~a~~~~~Al~~~~~~~~~~DLvltD-~~p~~~g~~~~~~l~~~~p~lpVi  776 (831)
T PRK13837        698 NGETVLLVEPDDALLERYEEKLAALGYEPVGFSTLSAAIAWISKDGKRFDLVLVD-QPSLGDSQLAIAALHAAAPTLPII  776 (831)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEEEC-CCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf             9977999859889999999999967996888689999999998389985399988-999998799999998618997499


Q ss_pred             EEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9926899999998885057432222222222222222222222222
Q gi|254780916|r   85 VQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVP  130 (482)
Q Consensus        85 iiT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~~  130 (482)
T Consensus       777 l-sg~~~~~~~~~~~~~~~~~fL~KPfs~~~LA~avR~aL~~~r~~  821 (831)
T PRK13837        777 L-AGSSLKMAAREALATAIAEILPKPISSRTLAYALRTALATARAA  821 (831)
T ss_pred             E-ECCCCHHHHHCHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCC
T ss_conf             9-76881443311022266706509999999999999998488887