HHsearch alignment for GI: 254780916 and conserved domain: PRK13856

>PRK13856 two-component response regulator VirG; Provisional.
Probab=99.85  E-value=1.2e-20  Score=165.65  Aligned_cols=118  Identities=23%  Similarity=0.215  Sum_probs=106.2

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             8838998699899999999999889889998937--99998608998999978546988899999999857898399992
Q gi|254780916|r   10 HKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQT   87 (482)
Q Consensus        10 ~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT   87 (482)
T Consensus         1 M~~ILlVEDD~~l~~~l~~~L~~~g~~v~~a~~~~~~~~~l~~~~~DlvIlDi~lp~~~Gl~~~~~ir~~~-~~piiilt   79 (241)
T PRK13856          1 MKHVLVIDDDVAMRHLIVEYLTIHAFKVTAVADSQQFNRVLSSETVDVVVVDLNLGREDGLEIVRSLATKS-DVPIIIIS   79 (241)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCC-CCCEEEEE
T ss_conf             99899996989999999999987799999989999999998659999999969998766134555640369-97369997


Q ss_pred             C-CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             6-8999999988850574322222222222222222222222
Q gi|254780916|r   88 T-QDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGV  128 (482)
Q Consensus        88 ~-~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~  128 (482)
T Consensus        80 ~~~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~~~lrr~~  121 (241)
T PRK13856         80 GDRLEEADKVVALELGATDFIAKPFGTREFLARIRVALRVRP  121 (241)
T ss_pred             CCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf             267878999999876998899777677799999999987454