HHsearch alignment for GI: 254780916 and conserved domain: TIGR01387
>TIGR01387 cztR_silR_copR heavy metal response regulator; InterPro: IPR006291 Members of this family contain a response regulator receiver domain and an associated transcriptional regulatory region. This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members are encoded by genes adjacent to genes which code for a member of the heavy metal sensor histidine kinase family (IPR006290 from INTERPRO), its partner in the two-component response regulator system. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=99.85 E-value=3.5e-22 Score=176.44 Aligned_cols=129 Identities=16% Similarity=0.196 Sum_probs=116.9
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 8998699899999999999889889998937--99998608998999978546988899999999857898399992689
Q gi|254780916|r 13 VLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQTTQD 90 (482)
Q Consensus 13 ILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT~~~ 90 (482)
T Consensus 1 iLvvEDeqkT~~YlqqGLsE~GYvvD~~~nG~DGL~lA~~~~Y~liILDvmLPG~DGW~vl~~LR~~~~~~PVl~LTA~D 80 (219)
T TIGR01387 1 ILVVEDEQKTAEYLQQGLSESGYVVDIASNGRDGLHLAEKDDYDLIILDVMLPGMDGWQVLKALRRSGKETPVLFLTARD 80 (219)
T ss_pred CEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 96763086026765305201234798877686247543688830899632588950689999984078987348883378
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999998885057432222222222222222222222222222211111111
Q gi|254780916|r 91 NIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVPSQENEHCALDSL 142 (482)
Q Consensus 91 ~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~~~~~~~~~~~~~L 142 (482)
T Consensus 81 ~v~DkvkGLd~GAdDYLvKPF~F~ELlARvR~~LR~~~~~~~~-evl~i~DL 131 (219)
T TIGR01387 81 SVADKVKGLDLGADDYLVKPFEFAELLARVRTLLRRSESLEST-EVLEIADL 131 (219)
T ss_pred CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CEEEECCC
T ss_conf 8454353011478654137877603799999876775203767-62686055