HHsearch alignment for GI: 254780916 and conserved domain: TIGR01387

>TIGR01387 cztR_silR_copR heavy metal response regulator; InterPro: IPR006291 Members of this family contain a response regulator receiver domain and an associated transcriptional regulatory region. This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members are encoded by genes adjacent to genes which code for a member of the heavy metal sensor histidine kinase family (IPR006290 from INTERPRO), its partner in the two-component response regulator system. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=99.85  E-value=3.5e-22  Score=176.44  Aligned_cols=129  Identities=16%  Similarity=0.196  Sum_probs=116.9

Q ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf             8998699899999999999889889998937--99998608998999978546988899999999857898399992689
Q gi|254780916|r   13 VLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQTTQD   90 (482)
Q Consensus        13 ILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT~~~   90 (482)
T Consensus         1 iLvvEDeqkT~~YlqqGLsE~GYvvD~~~nG~DGL~lA~~~~Y~liILDvmLPG~DGW~vl~~LR~~~~~~PVl~LTA~D   80 (219)
T TIGR01387         1 ILVVEDEQKTAEYLQQGLSESGYVVDIASNGRDGLHLAEKDDYDLIILDVMLPGMDGWQVLKALRRSGKETPVLFLTARD   80 (219)
T ss_pred             CEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf             96763086026765305201234798877686247543688830899632588950689999984078987348883378


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9999998885057432222222222222222222222222222211111111
Q gi|254780916|r   91 NIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVPSQENEHCALDSL  142 (482)
Q Consensus        91 ~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~~~~~~~~~~~~~L  142 (482)
T Consensus        81 ~v~DkvkGLd~GAdDYLvKPF~F~ELlARvR~~LR~~~~~~~~-evl~i~DL  131 (219)
T TIGR01387        81 SVADKVKGLDLGADDYLVKPFEFAELLARVRTLLRRSESLEST-EVLEIADL  131 (219)
T ss_pred             CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CEEEECCC
T ss_conf             8454353011478654137877603799999876775203767-62686055