HHsearch alignment for GI: 254780916 and conserved domain: TIGR01842

>TIGR01842 type_I_sec_PrtD type I secretion system ATPase; InterPro: IPR010128 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0015031 protein transport, 0016021 integral to membrane.
Probab=94.74  E-value=0.037  Score=34.90  Aligned_cols=78  Identities=17%  Similarity=0.134  Sum_probs=52.9

Q ss_pred             CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHC-CCCC-------CCCCC
Q ss_conf             222222223443204887327774367999999842675433210123465542100243311-2555-------53221
Q gi|254780916|r  151 QVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFG-DVDL-------QTKNS  222 (482)
Q Consensus       151 ~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG-~~~~-------~~~~~  222 (482)
T Consensus       344 ~~l~gi~F~~~aGe~laIIGPSgSGKStLaR~~vG~W~~~~G-~VRLDGadl~--qWD~e~lG~~iGYLPQdvELF~GTv  420 (556)
T TIGR01842       344 PTLRGISFAIQAGEALAIIGPSGSGKSTLARILVGIWPPASG-SVRLDGADLK--QWDRETLGKHIGYLPQDVELFSGTV  420 (556)
T ss_pred             HHHCCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCC-CEEEEHHHHH--CCCHHHCCCCCCCCCCCCCCCCCCH
T ss_conf             422786215637745888747865258898788721013565-3364033440--2375365880154798505076767


Q ss_pred             CCCCCCCCC
Q ss_conf             110012344
Q gi|254780916|r  223 AQFLGKFIE  231 (482)
Q Consensus       223 ~~~~g~~~~  231 (482)
T Consensus       421 a~NIARF~e  429 (556)
T TIGR01842       421 AENIARFGE  429 (556)
T ss_pred             HHHCCCCCC
T ss_conf             640244688