HHsearch alignment for GI: 254780916 and conserved domain: TIGR02040

>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR; InterPro: IPR011785 This entry represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor . These proteins contain a Helix-Turn-Helix motif of the "fis" type..

Probab=98.64  E-value=4.7e-08  Score=76.53  Aligned_cols=45  Identities=31%  Similarity=0.509  Sum_probs=42.2

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCC
Q ss_conf             899999999999999982872789997848998899999998188
Q gi|254780916|r  433 RRLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIREYNI  477 (482)
Q Consensus       433 ~~l~e~E~~~I~~aL~~~~Gn~~~aA~~LGIsR~tL~rKlk~~gi  477 (482)
T Consensus       409 ettdvvE~~cieAALeLtr~NR~sAAE~LgLSRQSLY~KLrrYgL  453 (453)
T TIGR02040       409 ETTDVVEQLCIEAALELTRDNRASAAEILGLSRQSLYVKLRRYGL  453 (453)
T ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             058999999999999860041789999974346888888774079