HHsearch alignment for GI: 254780916 and conserved domain: TIGR02154
>TIGR02154 PhoB phosphate regulon transcriptional regulatory protein PhoB; InterPro: IPR011879 PhoB is a DNA-binding response regulator protein acting with PhoR in a 2-component system responding to phosphate ion. PhoB acts as a positive regulator of gene expression for phosphate-related genes such as phoA, phoS, phoE and ugpAB as well as itself . It is often found proximal to genes for the high-affinity phosphate ABC transporter (pstSCAB; GenProp0190) and presumably regulates these as well.; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0006817 phosphate transport.
Probab=99.94 E-value=1.2e-26 Score=207.83 Aligned_cols=169 Identities=17% Similarity=0.228 Sum_probs=134.3
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECC--HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCCEEE
Q ss_conf 883899869989999999999988988999893--79999860899899997854698889999999985--78983999
Q gi|254780916|r 10 HKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNV--SDLSTISKIQVNVIFLSLINCEDDKENILKNIVDK--IPIVPIIV 85 (482)
Q Consensus 10 ~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~--~al~~l~~~~~dlillD~~mP~~dGlell~~i~~~--~p~ipvIi 85 (482)
T Consensus 2 ~~~iLvVEDE~AirEl~~~~L~~~gy~v~~A~d~~~A~~~~~E~~PDLILLDWMLPG~SGIel~R~Lr~~~~Tr~iPIIM 81 (226)
T TIGR02154 2 TRRILVVEDEPAIRELIAYNLEKAGYDVVEAGDGDEALTLINERLPDLILLDWMLPGTSGIELARRLRREPETRAIPIIM 81 (226)
T ss_pred CCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEE
T ss_conf 87256770826899999998416894699807979999998607998899614789975699998734763314888177
Q ss_pred EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 92689999999888505743222222222222222222222222222221111111122222222222222223443204
Q gi|254780916|r 86 QTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVVPSQENEHCALDSLIAVSPAMIQVVDLARKAGDCAIP 165 (482)
Q Consensus 86 iT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~~~~~~~~~~~~~LiG~S~~m~~v~~~i~~~a~~~~~ 165 (482)
T Consensus 82 LTARGeE~Drv~GLetGADDYvtKPFSp~EL~ARikAVLRR~~P~~-~~~~i~~~~l--------~lD~~~HRV~~~~~~ 152 (226)
T TIGR02154 82 LTARGEEEDRVRGLETGADDYVTKPFSPRELLARIKAVLRRIRPEL-SDEVIEVGDL--------ELDPVAHRVKRGGQP 152 (226)
T ss_pred EECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHH-HCCEEEECCE--------EECCCCCEEEECCEE
T ss_conf 4055560001131136887503678865889999999983167124-2020110347--------775102404313602
Q ss_pred EEEECCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88732777436799999984267543321
Q gi|254780916|r 166 IMIQGEFGVGKKRLSRFIHESGKRAFFPF 194 (482)
Q Consensus 166 vli~Ge~GtGK~~~A~~iH~~s~r~~~~f 194 (482)
T Consensus 153 ~~l-GPT-----Ef-RLL~FFM~HPeRV~ 174 (226)
T TIGR02154 153 LEL-GPT-----EF-RLLHFFMTHPERVY 174 (226)
T ss_pred CCC-CCH-----HH-HHHHHHHHCCCCEE
T ss_conf 146-870-----47-88999862377344