HHsearch alignment for GI: 254780916 and conserved domain: TIGR02788
>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155 This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA ..
Probab=90.28 E-value=0.14 Score=30.77 Aligned_cols=47 Identities=17% Similarity=0.171 Sum_probs=38.0
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 222222222344320488732777436799999984267543321012
Q gi|254780916|r 150 IQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIV 197 (482)
Q Consensus 150 ~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v 197 (482)
T Consensus 145 g~~~~Fl~~Ai~~~knIii~GGTgSGKTTf~kal~~~IP~-~ER~iTI 191 (328)
T TIGR02788 145 GDIKEFLRLAIASRKNIIISGGTGSGKTTFLKALVKEIPK-DERLITI 191 (328)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCC-CCCEEEE
T ss_conf 8887999999873891999906897189999999732762-2527888