HHsearch alignment for GI: 254780916 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=99.50 E-value=1.7e-14 Score=122.15 Aligned_cols=135 Identities=25% Similarity=0.279 Sum_probs=102.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf 43204887327774367999999842675433210123465542100243311255553221110012344667147516
Q gi|254780916|r 161 DCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTIVLE 240 (482)
Q Consensus 161 ~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl~l~ 240 (482)
T Consensus 17 ~~~~~ill~GppGtGKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vl~iD 91 (151)
T cd00009 17 PPPKNLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNASDLLEGLVVAELFGHF-----LVRLLFELAEKAKPGVLFID 91 (151)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHH-----HHHHHHHHHHHCCCCEEEEE
T ss_conf 7998089989999886599999999712137982785477704677775760577-----88989999997699869820
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64200188999888877642001123553212343156521433211111123337999886543344677
Q gi|254780916|r 241 EPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINIST 311 (482)
Q Consensus 241 ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~~~~g~fr~dLy~rL~~~~i~iPp 311 (482)
T Consensus 92 Ei~~l~~~~~~~~~~~l~~~~~~~-----~~~~~~~vI~~tn~~~~-----~~~~~~~~~R~~-~~i~~~~ 151 (151)
T cd00009 92 EIDSLSRGAQNALLRVLETLNDLR-----IDRENVRVIGATNRPLL-----GDLDRALYDRLD-IRIVIPL 151 (151)
T ss_pred CHHHCCHHHHHHHHHHHHHHCCCC-----CCCCCEEEEEEECCCCC-----CCHHHHHHCCCC-EEEECCC
T ss_conf 166559999999999998715754-----06788899995289988-----683776425598-6986389