HHsearch alignment for GI: 254780916 and conserved domain: cd00267

>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=92.90  E-value=0.28  Score=28.64  Aligned_cols=107  Identities=20%  Similarity=0.164  Sum_probs=58.3

Q ss_pred             CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH--HHHHCCCCCCCCCCCCCCCC--
Q ss_conf             22222234432048873277743679999998426754332101234655421002--43311255553221110012--
Q gi|254780916|r  153 VDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIE--KFLFGDVDLQTKNSAQFLGK--  228 (482)
Q Consensus       153 ~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e--~~lFG~~~~~~~~~~~~~g~--  228 (482)
T Consensus        15 l~~i~~~i~~Ge~~~i~G~nGaGKSTLl~~l~gl~~~~~G-~i~~~g~~~~~~~~~~~~~~i~~v~QLSgGqkqrv~iA~   93 (157)
T cd00267          15 LDNVSLTLKAGEIVALVGPNGSGKSTLLRAIAGLLKPTSG-EILIDGKDIAKLPLEELRRRIGYVPQLSGGQRQRVALAR   93 (157)
T ss_pred             EEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC-EEEECCEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf             8211789879979999878899989999999588479962-899999999979999999406087668869999999999


Q ss_pred             CCCCCCCEEEECCCCH-HHHHHHHHHHHHHHHH
Q ss_conf             3446671475166420-0188999888877642
Q gi|254780916|r  229 FIEANGGTIVLEEPDA-LPLAVQGRIYNFIETG  260 (482)
Q Consensus       229 ~~~a~~Gtl~l~ei~~-L~~~~Q~~Ll~~l~~~  260 (482)
T Consensus        94 al~~~p~ililDEPtsgLD~~~~~~l~~~i~~l  126 (157)
T cd00267          94 ALLLNPDLLLLDEPTSGLDPASRERLLELLREL  126 (157)
T ss_pred             HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf             997099999996987668999999999999999