HHsearch alignment for GI: 254780916 and conserved domain: cd01124

>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs. A related protein is found in archaea.
Probab=92.45  E-value=0.071  Score=32.90  Aligned_cols=30  Identities=17%  Similarity=0.171  Sum_probs=19.9

Q ss_pred             EEEEECCCCCHHHHHHHH-HHHCCCCCCCCCC
Q ss_conf             488732777436799999-9842675433210
Q gi|254780916|r  165 PIMIQGEFGVGKKRLSRF-IHESGKRAFFPFF  195 (482)
Q Consensus       165 ~vli~Ge~GtGK~~~A~~-iH~~s~r~~~~fi  195 (482)
T Consensus         1 stLi~G~pGsGKT~~a~qfl~~~-a~~ge~~l   31 (187)
T cd01124           1 STLLSGGPGTGKTTFALQFLYAG-LARGEPGL   31 (187)
T ss_pred             CEEEEECCCCCHHHHHHHHHHHH-HHCCCCEE
T ss_conf             91587689999999999999999-87699789