HHsearch alignment for GI: 254780916 and conserved domain: cd01380

>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=94.93  E-value=0.022  Score=36.42  Aligned_cols=24  Identities=29%  Similarity=0.548  Sum_probs=20.2

Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf             432048873277743679999998
Q gi|254780916|r  161 DCAIPIMIQGEFGVGKKRLSRFIH  184 (482)
Q Consensus       161 ~~~~~vli~Ge~GtGK~~~A~~iH  184 (482)
T Consensus        84 ~~~QsIiiSGESGaGKTe~~K~il  107 (691)
T cd01380          84 EKNQSIIVSGESGAGKTVSAKYIM  107 (691)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHH
T ss_conf             998069996279998779999999