>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.

Probab=94.22 E-value=0.11 Score=31.51 Aligned_cols=100 Identities=15% Similarity=0.090 Sum_probs=59.7 Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC-- Q ss_conf 222222223443204887327774367999999842675433210123465542100243311255553221110012-- Q gi|254780916|r 151 QVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGK-- 228 (482) Q Consensus 151 ~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~-- 228 (482) T Consensus 14 ~vl~~is~~i~~ge~~~l~G~NGsGKTTl~~~l~G~~~~~~G~i-~~~~~---------~~i~y~~QLSgGqkqr~~la~ 83 (144) T cd03221 14 LLLKDISLTINPGDRIGLVGRNGAGKSTLLKLIAGELEPDEGIV-TWGST---------VKIGYFEQLSGGEKMRLALAK 83 (144) T ss_pred EEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEE-EECCC---------CEEEEEHHCCHHHHHHHHHHH T ss_conf 99963489987999999998999849999999848988985099-99996---------089987007999999999999 Q ss_pred CCCCCCCEEEECCCCH-HHHHHHHHHHHHHHHH Q ss_conf 3446671475166420-0188999888877642 Q gi|254780916|r 229 FIEANGGTIVLEEPDA-LPLAVQGRIYNFIETG 260 (482) Q Consensus 229 ~~~a~~Gtl~l~ei~~-L~~~~Q~~Ll~~l~~~ 260 (482) T Consensus 84 al~~~p~iliLDEPt~~LD~~~~~~i~~~l~~~ 116 (144) T cd03221 84 LLLENPNLLLLDEPTNHLDLESIEALEEALKEY 116 (144) T ss_pred HHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC T ss_conf 972599899995775558999999999999970

HHsearch alignment for GI: 254780916 and conserved domain: cd03221