HHsearch alignment for GI: 254780916 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=96.06 E-value=0.029 Score=35.59 Aligned_cols=38 Identities=18% Similarity=0.089 Sum_probs=28.1
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 22222222344320488732777436799999984267
Q gi|254780916|r 151 QVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGK 188 (482)
Q Consensus 151 ~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~ 188 (482)
T Consensus 15 ~il~~isl~i~~Ge~v~i~G~sGsGKSTLl~~l~Gl~~ 52 (166)
T cd03223 15 VLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWP 52 (166)
T ss_pred EEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 88944588988999999995899988999999869876