HHsearch alignment for GI: 254780916 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=95.07 E-value=0.012 Score=38.32 Aligned_cols=60 Identities=18% Similarity=0.171 Sum_probs=40.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 111112222222222222222344320488732777436799999984267543321012
Q gi|254780916|r 138 ALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIV 197 (482)
Q Consensus 138 ~~~~LiG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v 197 (482)
T Consensus 114 tl~~L~~~g~~~~~~~~~L~~~v~~~~~ilIsG~TGSGKTT~l~all~~i~~~~~riiti 173 (283)
T pfam00437 114 TLDDLGMTGAFDADIAEFLRQAVQARGNILVSGGTGSGKTTLLYALLNEINTDDERIVTI 173 (283)
T ss_pred CHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 999973897785999999999998197599988999988999999998408777627873