HHsearch alignment for GI: 254780916 and conserved domain: pfam00493

Probab=99.14  E-value=6.6e-10  Score=89.63  Aligned_cols=114  Identities=16%  Similarity=0.214  Sum_probs=84.7

Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC-CCC--CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             4320488732777436799999984267543321012-346--5542100243311255553221110012344667147
Q gi|254780916|r  161 DCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIV-NCG--MIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTI  237 (482)
Q Consensus       161 ~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v-~c~--~~~~~~~e~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl  237 (482)
T Consensus        55 Rg~ihiLLvGdPG~gKSqlLk~~~~~~pr~--~~tsg~~ss~~GLTa~~~-------~d~~~~~~~leaGalvlAd~Gv~  125 (327)
T pfam00493        55 RGDINVLLVGDPGTAKSQLLKYVAKLAPRA--VYTSGKGSSAAGLTAAVV-------RDPDTGEWTLEAGALVLADGGVC  125 (327)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHCCCC--EEECCCCCCCCCCEEEEE-------EECCCCCEEEECCCEEECCCCEE
T ss_conf             365118984699815609999999868870--883177665677615899-------80688836983684775589827


Q ss_pred             EECCCCHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCEEEEECCC
Q ss_conf             5166420018899988887764200112--355321234315652143
Q gi|254780916|r  238 VLEEPDALPLAVQGRIYNFIETGKIEFF--DSRGAIRLDVRLIFLTEK  283 (482)
Q Consensus       238 ~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~--g~~~~~~~~~RiIa~t~~  283 (482)
T Consensus       126 cIDEfdk~~~~d~saL~EAMEqqtVsIaKaGi~~tL~ar~sVlAaaNP  173 (327)
T pfam00493       126 CIDEFDKMNEEDRVAIHEAMEQQTISIAKAGIVATLNARCSVLAAANP  173 (327)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHCEEEEECCCEEEEECCCCEEEEEECC
T ss_conf             850055588767999999998681776338538972587179985277