BLAST/PSIBLAST alignment of GI: 254780916 and GI: 150397881 at iteration 1
>gi|150397881|ref|YP_001328348.1| two component sigma54 specific Fis family transcriptional regulator [Sinorhizobium medicae WSM419] Length = 549
>gi|150029396|gb|ABR61513.1| two component, sigma54 specific, transcriptional regulator, Fis family [Sinorhizobium medicae WSM419] Length = 549
 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 172/503 (34%), Positives = 282/503 (56%), Gaps = 36/503 (7%)

Query: 13  VLIIDKDDEQIKIIKDHVESYGYDVFIVNVSDLSTISKIQ-----VNVIFLSLINCEDDK 67
           +L+ID D  Q +++ + +E  G+   + + +  S +  +Q     +NVI L L+    + 
Sbjct: 43  ILVIDDDPVQRRLLTNMIERLGHVAHLAD-NGRSGLELMQRKGGIINVILLDLLMPGMNG 101

Query: 68  ENILKNIVDKIPIVPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLC----DSIICA 123
            + L+ + ++    P+IVQT Q  I+ +   +      F +  VS ++L     +++  A
Sbjct: 102 HSFLEALAERGVDTPVIVQTGQGGIETVVQAMQAGAFDFLVKPVSPERLSIALGNALKMA 161

Query: 124 LREGVVPSQENEH---CALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLS 180
            R+G V +           D +++ SPAMI+V+DLAR+A    IP++++GE GVGK+ ++
Sbjct: 162 SRDGKVKTARRPRGGSVGFDDIVSASPAMIRVIDLARRAAQSNIPVVLEGESGVGKEMVA 221

Query: 181 RFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFG-DVDLQTKNSAQFLGKFIEANGGTIVL 239
           R I  +  RA  PF  VNCG I  + +E  LFG +    T  S +  GKF++A+GGT+ L
Sbjct: 222 RAIQAASDRATKPFVTVNCGAIPGNLVESILFGHEKGAFTGASEKHSGKFVDADGGTLFL 281

Query: 240 EEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLY 299
           +E   LPL VQ ++   ++ G+IE   +R   +++VRLI  T K+L+ +V+   FR+DLY
Sbjct: 282 DEIGDLPLEVQVKLLRAVQQGEIETVGARQPQKVNVRLISATNKDLINEVREGRFREDLY 341

Query: 300 YRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQ-ISISDKALSLLTKYPWIDNV 358
           YR++VF I I  LR R EDIP LV  F++ F  +  + Q +++S+ A++LLT Y W  N+
Sbjct: 342 YRLNVFPITIPALRRRKEDIPVLVRAFVERFAAEQRLDQRLTVSNGAMALLTSYDWPGNI 401

Query: 359 QELKNILLRAVIGLKDSH-----------------LTEDRFVLLLSREGKKEREFHTETA 401
           ++L+N + RAV+ L + H                 +  DR  L     G + R      A
Sbjct: 402 RQLENAIFRAVV-LAEGHELTVRDFPQVATQIPGYIVADRTGLSWGDGGPEGRTAPDRPA 460

Query: 402 CTCYTEGKSSDTILDNLSQE---SIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVA 458
                 G       D   +    +I ++ + GEVR+L+++E+E+I  A+K YR QMS+VA
Sbjct: 461 AVTADAGALETAPTDQRDERIENAIASLSEGGEVRKLAEVEEELIRFALKFYRGQMSQVA 520

Query: 459 RRLGIGRSTLYRKIREYNIEVDS 481
           R+LGIGRSTLYRK+++Y I+ D+
Sbjct: 521 RKLGIGRSTLYRKLKDYGIDPDN 543