BLAST/PSIBLAST alignment of GI: 254780916 and GI: 15966548 at iteration 1
>gi|15966548|ref|NP_386901.1| putative sigma-54-dependent transcription regulator protein [Sinorhizobium meliloti 1021] Length = 513
>gi|307300415|ref|ZP_07580195.1| two component, sigma54 specific, transcriptional regulator, Fis family [Sinorhizobium meliloti BL225C] Length = 513
>gi|307318280|ref|ZP_07597715.1| two component, sigma54 specific, transcriptional regulator, Fis family [Sinorhizobium meliloti AK83] Length = 513
>gi|15075819|emb|CAC47374.1| Putative sigma-54-dependent transcription regulator [Sinorhizobium meliloti 1021] Length = 513
>gi|306895962|gb|EFN26713.1| two component, sigma54 specific, transcriptional regulator, Fis family [Sinorhizobium meliloti AK83] Length = 513
>gi|306904581|gb|EFN35165.1| two component, sigma54 specific, transcriptional regulator, Fis family [Sinorhizobium meliloti BL225C] Length = 513
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 286/505 (56%), Gaps = 38/505 (7%)
Query: 13 VLIIDKDDEQIKIIKDHVESYGYDVFIVNVSDLSTISKIQ-----VNVIFLSLINCEDDK 67
+L+ID D Q +++ + +E G+ + + + S + +Q +NVI L L+ E +
Sbjct: 5 ILVIDDDPVQRRLLTNMIERLGHVAHLAD-NGRSGLELLQRKGGIINVILLDLLMPEMNG 63
Query: 68 ENILKNIVDKIPIVPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLC----DSIICA 123
+L+ + ++ +P+IVQT Q I+ + + F + VS ++L +++ A
Sbjct: 64 HGLLEALAERGIDIPVIVQTGQGGIETVVQAMQAGAFDFLVKPVSPERLSIALGNALKMA 123
Query: 124 LREGVVPSQENEH---CALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLS 180
R+G V + D +++ SPAMI+V+DLAR+A IPI+++GE GVGK+ ++
Sbjct: 124 SRDGKVKTARRPRGGAVGFDDIVSASPAMIRVIDLARRAAQSNIPIVLEGESGVGKEMVA 183
Query: 181 RFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFG-DVDLQTKNSAQFLGKFIEANGGTIVL 239
R I + RA PF VNCG I + +E LFG + T S + GKF++A+GGT+ L
Sbjct: 184 RAIQAASDRAAKPFVTVNCGAIPHNLVESILFGHEKGAFTGASEKHSGKFVDADGGTLFL 243
Query: 240 EEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLY 299
+E LPL VQ ++ ++ G+IE +R +++VRLI T K+L+ +V+ FR+DLY
Sbjct: 244 DEIGDLPLDVQVKLLRAVQQGEIETIGARQPQKVNVRLISATNKDLITEVREGRFREDLY 303
Query: 300 YRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQ-ISISDKALSLLTKYPWIDNV 358
YR++VF I I LR R EDIP LV F++ F + + Q +++S A++LLT Y W N+
Sbjct: 304 YRLNVFPITIPALRRRKEDIPVLVRAFVERFSAEQRLDQRLTVSSGAMALLTSYDWPGNI 363
Query: 359 QELKNILLRAVIGLKDSH-----------------LTEDRFVLLLSREGKKEREFHTETA 401
++L+N + RAV+ L D H + DR L G + R + A
Sbjct: 364 RQLENAIFRAVV-LADGHELTVRDFPQVATQIPGYIVADRSGLSWGEAGPERRPASGQLA 422
Query: 402 CTCYT-----EGKSSDTILDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSE 456
+ S+ + + +I ++ + GEVR+L+++E+E+I A+K YR QMS+
Sbjct: 423 AAQADAGAREQPAHSEQTPEGRLENAIASLSEGGEVRKLAEVEEELIRFALKFYRGQMSQ 482
Query: 457 VARRLGIGRSTLYRKIREYNIEVDS 481
VAR+LGIGRSTLYRK+++Y I+ D+
Sbjct: 483 VARKLGIGRSTLYRKLKDYGIDPDN 507