BLAST/PSIBLAST alignment of GI: 254780916 and GI: 209550871 at iteration 1
>gi|209550871|ref|YP_002282788.1| Fis family transcriptional regulator [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 514
>gi|209536627|gb|ACI56562.1| two component, sigma54 specific, transcriptional regulator, Fis family [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 514
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 287/503 (57%), Gaps = 39/503 (7%)
Query: 12 RVLIIDKDDEQIKIIKDHVESYGYDVFIVNVSDLSTISKIQV-------NVIFLSLINCE 64
++L+++ D Q +++K+ +E +G+ +V+ ++ I V NVI L L+ E
Sbjct: 12 QILVVEDDPVQRRLLKNAIERHGH---VVHQAENGRIGLEMVKRDSGLFNVIVLDLMMPE 68
Query: 65 DDKENILKNIVDKIPIVPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICAL 124
L + + +P+IVQT Q I+ + + F + VS +++ SI A+
Sbjct: 69 MTGLEFLDALHEFGTQIPVIVQTGQGGIETVVQAMRAGAFDFVVKPVSPERIATSISNAM 128
Query: 125 R--EGVVPSQENEHC-----ALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKK 177
+ + V ++ D +++ SPAM++V+DLA++A IP++++GE GVGK+
Sbjct: 129 KLDQREVKARAGRRSRSGSVGFDDIVSASPAMLRVIDLAQRAAQSNIPVVLEGESGVGKE 188
Query: 178 RLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFG-DVDLQTKNSAQFLGKFIEANGGT 236
++R I G R+ PF VNCG I + +E LFG + T + + +GKF+EA+GGT
Sbjct: 189 LVARAIQSGGDRSNKPFVTVNCGAIPHNLVESILFGHEKGAFTGATERHIGKFMEADGGT 248
Query: 237 IVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRK 296
I L+E LPL VQ ++ ++ G+IE +R A +++VRLI T K+L+ +VK+ FR+
Sbjct: 249 IFLDEIGDLPLEVQVKLLRAVQQGEIETVGARTAHKVNVRLISATNKDLIEEVKNGHFRE 308
Query: 297 DLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCT--KNAIKQISISDKALSLLTKYPW 354
DLYYR++VF I I LR R EDIP LV F + F + KN ++++++ AL+LLT Y W
Sbjct: 309 DLYYRLNVFPITIPALRKRKEDIPHLVRVFAERFSSEQKNG-RRMTVNAGALALLTAYDW 367
Query: 355 IDNVQELKNILLRAVIGLKDSHLTEDRFVLLLSREGKKEREFHTETACTCYTEGKSSDTI 414
N+++L+N + RAV+ + LTE F + ++ E E A G D
Sbjct: 368 PGNIRQLENAIFRAVVLAEGPELTEGDFPQIAAQ--LPEYEVVDHLALVADNTGLDPDDS 425
Query: 415 ----------------LDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVA 458
L +S+ +I ++ G+VRRL+D+E+E+I A+K YR QMS+VA
Sbjct: 426 YGEEFRASISGEVHHRLSEVSENAIASVNPAGDVRRLADVEEELIRFALKFYRGQMSQVA 485
Query: 459 RRLGIGRSTLYRKIREYNIEVDS 481
R+LGIGRSTLYRK+++Y I+ D+
Sbjct: 486 RKLGIGRSTLYRKLKDYGIDPDN 508