RPSBLAST alignment for GI: 254780916 and conserved domain: TIGR02915
>gnl|CDD|163070 TIGR02915, PEP_resp_reg, putative PEP-CTERM system response regulator. Members of this protein family share full-length homology with (but do not include) the acetoacetate metabolism regulatory protein AtoC. These proteins have a Fis family DNA binding sequence (pfam02954), a response regulator receiver domain (pfam00072), and sigma-54 interaction domain (pfam00158). Length = 445
Score = 162 bits (411), Expect = 2e-40
Identities = 104/341 (30%), Positives = 157/341 (46%), Gaps = 34/341 (9%)
Query: 138 ALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIV 197
AL LI SP M ++ K I +++ GE G GK+ L+R +H+ R F +
Sbjct: 137 ALRGLITSSPGMQKICRTIEKIAPSDITVLLLGESGTGKEVLARALHQLSDRKDKRFVAI 196
Query: 198 NCGMIDQDKIEKFLFG-DVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNF 256
NC I ++ +E LFG + T Q LGK A+GGT+ L+E LPL +Q ++ F
Sbjct: 197 NCAAIPENLLESELFGYEKGAFTGAVKQTLGKIEYAHGGTLFLDEIGDLPLNLQAKLLRF 256
Query: 257 IETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRS 316
++ IE R I +DVR++ T ++L + FR+DL+YRI+ I I LRSR
Sbjct: 257 LQERVIERLGGREEIPVDVRIVCATNQDLKRMIAEGTFREDLFYRIAEISITIPPLRSRD 316
Query: 317 EDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVIGLKDSH 376
D L + FL+ F + K +D AL L + W NV+EL+N + RAVI + +
Sbjct: 317 GDAVLLANAFLERFARELKRKTKGFTDDALRALEAHAWPGNVRELENKVKRAVIMAEGNQ 376
Query: 377 LTEDRFVLLLSREGKKEREFHTETACTCYTEGKSSDTILDNLSQESIPAIGQDGEVRRLS 436
+T + D LD + P EVR
Sbjct: 377 ITAE-------------------------------DLGLDARERAETPLEVNLREVR--E 403
Query: 437 DIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIREYNI 477
E+E + A+ ++ A LGI R TLY ++++ I
Sbjct: 404 RAEREAVRKAIARVDGNIARAAELLGITRPTLYDLMKKHGI 444