RPSBLAST alignment for GI: 254780916 and conserved domain: TIGR02974

>gnl|CDD|163093 TIGR02974, phageshock_pspF, psp operon transcriptional activator PspF. Members of this protein family are PspF, the sigma-54-dependent transcriptional activator of the phage shock protein (psp) operon, in Escherichia coli and numerous other species. The psp operon is induced by a number of stress conditions, including heat shock, ethanol, and filamentous phage infection. Changed com_name to adhere to TIGR role notes conventions. 09/15/06 - DMH. Length = 329

 Score =  112 bits (282), Expect = 2e-25
 Identities = 69/230 (30%), Positives = 113/230 (49%), Gaps = 2/230 (0%)

Query: 142 LIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGM 201
           LI  S A ++V++   +      P++I GE G GK+ ++  +H   KR   P   +NC  
Sbjct: 1   LIGESNAFLEVLEQVSRLAPLDRPVLIIGERGTGKELIAARLHYLSKRWQGPLVKLNCAA 60

Query: 202 IDQDKIEKFLFG-DVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIETG 260
           + ++ ++  LFG +    T    +  G+F  A+GGT+ L+E     L VQ ++   IE G
Sbjct: 61  LSENLLDSELFGHEAGAFTGAQKRHQGRFERADGGTLFLDELATASLLVQEKLLRVIEYG 120

Query: 261 KIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIP 320
           + E       +++DVRL+  T  +L        FR DL  R++  +I +  LR R EDI 
Sbjct: 121 EFERVGGSQTLQVDVRLVCATNADLPALAAEGRFRADLLDRLAFDVITLPPLRERQEDIM 180

Query: 321 WLVHFFLQSFCTKNAIKQIS-ISDKALSLLTKYPWIDNVQELKNILLRAV 369
            L   F      +  +      + +A   L +Y W  NV+ELKN++ R+V
Sbjct: 181 LLAEHFAIRMARELGLPLFPGFTPQAREQLLEYHWPGNVRELKNVVERSV 230